RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TP73O15350 636 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 APBB3O95704 486 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 TRBC1P01850 177 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 FGF1P05230 155 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
LINC00339-213ENST00000642137 HOXA6P31267 233 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 DRD3P35462 400 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 GRIA4P48058 902 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 NPY2RP49146 381 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 NEK3P51956 506 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 TERF1P54274 439 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 EPHB1P54762 984 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 CDH17Q12864 832 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 CBLBQ13191 982 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 MSLNQ13421 630 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-213ENST00000642137 QPCTQ16769 361 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 TTC31Q49AM3 519 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SIRPB2Q5JXA9 342 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 FBXL19Q6PCT2 694 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 PPP1R21Q6ZMI0 780 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 ZSWIM9Q86XI8 627 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SLC25A41Q8N5S1 370 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 FAM131CQ96AQ9 280 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SCRN2Q96FV2 425 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 OMDQ99983 421 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 HINFPQ9BQA5 517 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 MAGEE1Q9HCI5 957 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-213ENST00000642137 FBXL12Q9NXK8 326 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
LINC00339-213ENST00000642137 A0A1W2PP55 124 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 K7ESF4 209 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 SLC7A4O43246 635 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 USP12O75317 370 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 TMEM63AO94886 807 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 CYP2A6P11509 494 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 ADRB3P13945 408 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 AVPR2P30518 371 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 GRIA1P42261 906 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 METAP1P53582 386 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 CNTN1Q12860 1018 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 OLIG2Q13516 323 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 TRADDQ15628 312 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 PARS2Q7L3T8 475 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 AADATQ8N5Z0 425 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 EIF1ADQ8N9N8 165 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 DNAAF3Q8N9W5 541 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 LPCAT1Q8NF37 534 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 OR52K1Q8NGK4 314 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 RUBCNQ92622 972 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 HHIPQ96QV1 700 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 FOXP3Q9BZS1 431 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 SLC6A17Q9H1V8 727 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 NEUROG2Q9H2A3 272 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 XAB2Q9HCS7 855 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 BFARQ9NZS9 450 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 HACD3Q9P035 362 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 USP36Q9P275 1121 aaKnown RBP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00339-213ENST00000642137 FZD4Q9ULV1 537 aa12.38□□□□□ -0.43
LINC00339-213ENST00000642137 CCDC163A0A0D9SF12 145 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 ESYT3A0FGR9 886 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 AREL1O15033 823 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 LAMTOR5O43504 91 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 AP1G1O43747 822 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 GPR37L1O60883 481 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 ZNF217O75362 1048 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
LINC00339-213ENST00000642137 SLC34A2O95436 690 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 OXTRP30559 389 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 HNF1BP35680 557 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 P2RY2P41231 377 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 CHRNA4P43681 627 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 TPMTP51580 245 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 PLTPP55058 493 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 CUL1Q13616 776 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 GALNT3Q14435 633 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 TMEM52BQ4KMG9 183 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 ARMC3Q5W041 872 aa12.37□□□□□ -0.43
LINC00339-213ENST00000642137 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms