RNA–Protein interactions for RNA: ENST00000639607.1

SPIN3-226, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,942 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-226ENST00000639607 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 DOCK4Q8N1I0 1966 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 SZT2Q5T011 3432 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 GREB1Q4ZG55 1949 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 IGLV3-10A0A075B6K4 115 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 A0A088AWK7 358 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 PPP6CO00743 305 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 CFLARO15519 480 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 GRID2O43424 1007 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 LDB2O43679 373 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 SNAP91O60641 907 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 KLHL2O95198 593 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 GOT2P00505 430 aaKnown RBP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 AOC1P19801 751 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 BFSP2Q13515 415 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 CNTN4Q8IWV2 1026 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 EFHBQ8N7U6 833 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 SREK1Q8WXA9 508 aaKnown RBP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 SLC22A12Q96S37 553 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 POLR1EQ9GZS1 481 aaKnown RBP13.1□□□□□ -0.31
SPIN3-226ENST00000639607 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 DNAJC28Q9NX36 388 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
SPIN3-226ENST00000639607 CCDC162PA2VCL2 907 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 TARM1B6A8C7 271 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 WFS1O76024 890 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 TM7SF2O76062 418 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 CORO1AP31146 461 aaKnown RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 CDK18Q07002 472 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 TLDC1Q6P9B6 456 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 SNX32Q86XE0 403 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 DRC3Q9H069 523 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 PLK2Q9NYY3 685 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 SPO11Q9Y5K1 396 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 AP3B1O00203 1094 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 MATN2O00339 956 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 NUDT2P50583 147 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 KLF10Q13118 480 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 PPP1R3AQ16821 1122 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 USP13Q92995 863 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 PPM1HQ9ULR3 514 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 MIA3Q5JRA6 1907 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 HDAC3O15379 428 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 CIB2O75838 187 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 SIX3O95343 332 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 HOXD9P28356 352 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-226ENST00000639607 ELF1P32519 619 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 GNA12Q03113 381 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 SLC26A7Q8TE54 656 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 PXYLP1Q8TE99 480 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 PTGDR2Q9Y5Y4 395 aa13.09□□□□□ -0.31
SPIN3-226ENST00000639607 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 ACSL4O60488 711 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 PRAMEF11O60813 436 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 S1PR4O95977 384 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 COX4I1P13073 169 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 TCN1P20061 433 aaPredicted RBP13.08□□□□□ -0.32
SPIN3-226ENST00000639607 HTR7P34969 479 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 CSRP3P50461 194 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 PKNOX1P55347 436 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 IL10RBQ08334 325 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
SPIN3-226ENST00000639607 FSCBQ5H9T9 825 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
SPIN3-226ENST00000639607 MUC3BQ9H195 1237 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 GIMAP2Q9UG22 337 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 NCF1BA6NI72 391 aaPredicted RBP13.08□□□□□ -0.32
SPIN3-226ENST00000639607 DRGXA6NNA5 263 aa13.08□□□□□ -0.32
SPIN3-226ENST00000639607 NCF1CA8MVU1 366 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms