RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 WASH3PC4AMC7 463 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 HTRA2O43464 458 aaPredicted RBP15.45■□□□□ 0.06
CLN6-219ENST00000637329 TIMM44O43615 452 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 RRP9O43818 475 aaKnown RBP15.45■□□□□ 0.06
CLN6-219ENST00000637329 KRT37O76014 449 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 KRT38O76015 456 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 CRTAMO95727 393 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 PRLP01236 227 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 NMBRP28336 390 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 PDE1BQ01064 536 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 ACVR1Q04771 509 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 RAD51Q06609 339 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 GALNT3Q14435 633 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 TSTD2Q5T7W7 516 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 ARMC12Q5T9G4 340 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 TMEM215Q68D42 235 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 KDELC2Q7Z4H8 507 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 TRABD2AQ86V40 505 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 C12orf40Q86WS4 652 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 RNF135Q8IUD6 432 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 CNTN4Q8IWV2 1026 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 LMNTD2Q8IXW0 634 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 PPM1NQ8N819 430 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 NAT16Q8N8M0 369 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 RMDN1Q96DB5 314 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 MFSD3Q96ES6 412 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 ZFYVE19Q96K21 471 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 MRGPRX3Q96LB0 322 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 NSMCE3Q96MG7 304 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
CLN6-219ENST00000637329 CPNE1Q99829 537 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 C19orf43Q9BQ61 176 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 KXD1Q9BQD3 176 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 FAM167BQ9BTA0 163 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 TRABDQ9H4I3 376 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 SMYD2Q9NRG4 433 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLN6-219ENST00000637329 CHKBQ9Y259 395 aa15.45■□□□□ 0.06
CLN6-219ENST00000637329 REV3LO60673 3130 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 CXorf49A8MYA2 514 aaPredicted RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 ANHXE9PGG2 379 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 SIN3BO75182 1162 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 FAM155BO75949 473 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 PGLSO95336 258 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 KRT15P19012 456 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 PSMA3P25788 255 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 CSE1LP55060 971 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 ST8SIA6P61647 398 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 PPP2R2AP63151 447 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 DNAJC3Q13217 504 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 HTR4Q13639 388 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 E2F5Q15329 346 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 DLG2Q15700 870 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 CARD16Q5EG05 197 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 DGKKQ5KSL6 1271 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 PARM1Q6UWI2 310 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 SUGP1Q8IWZ8 645 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 PHTF2Q8N3S3 785 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 TERB1Q8NA31 727 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 CALML6Q8TD86 181 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 MZB1Q8WU39 189 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 FGF14Q92915 247 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 RPL10LQ96L21 214 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 ZNF641Q96N77 438 aaPredicted RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 CIPCQ9C0C6 399 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 SSU72Q9NP77 194 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 C20orf96Q9NUD7 363 aaPredicted RBP15.44■□□□□ 0.06
CLN6-219ENST00000637329 TXNDC16Q9P2K2 825 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 TBK1Q9UHD2 729 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 PCDHGC4Q9Y5F7 938 aa15.44■□□□□ 0.06
CLN6-219ENST00000637329 A6NNZ2 444 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ANKRD66B4E2M5 251 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ARNTLO00327 626 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 POLR3GO15318 223 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 SLC7A4O43246 635 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 LDB2O43679 373 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 POP4O95707 220 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 SNRPAP09012 282 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 GP5P40197 560 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 RECQLP46063 649 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 ARCN1P48444 511 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 CCNHP51946 323 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 SMAD4Q13485 552 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 GRM2Q14416 872 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 TAF1AQ15573 450 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 QPCTQ16769 361 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 UGP2Q16851 508 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 MYLK3Q32MK0 819 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ITPRIPL2Q3MIP1 535 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 TUBB8Q3ZCM7 444 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 CES3Q6UWW8 571 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 PACS1Q6VY07 963 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 GLT6D1Q7Z4J2 308 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 EXOC3L1Q86VI1 746 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 CYP4X1Q8N118 509 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 BLOC1S5Q8TDH9 187 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms