RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 SEL1L3Q68CR1 1132 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 FRMD7Q6ZUT3 714 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 RNF135Q8IUD6 432 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 FBXO22Q8NEZ5 403 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 OR7D4Q8NG98 312 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 STMN2Q93045 179 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 MRPL57Q9BQC6 102 aaKnown RBP12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 TTLL2Q9BWV7 592 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 ARL5AQ9Y689 179 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.4
UBASH3A-209ENST00000635325 SLC7A4O43246 635 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 S1PR4O95977 384 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 OR1D2P34982 312 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 CDKN2DP55273 166 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 CCL23P55773 120 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 RPS24P62847 133 aaKnown RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 SMARCB1Q12824 385 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 KLF10Q13118 480 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 PRKAA1Q13131 559 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 ZNF235Q14590 738 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 TAF11Q15544 211 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 TSNAXIP1Q2TAA8 658 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 NET1Q7Z628 596 aaPredicted RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 GIMAP7Q8NHV1 300 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 CALML6Q8TD86 181 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 BLOC1S5Q8TDH9 187 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 ANKRD49Q8WVL7 239 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 RSRC1Q96IZ7 334 aaKnown RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 DNAJC1Q96KC8 554 aaKnown RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 NSMCE3Q96MG7 304 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 POMKQ9H5K3 350 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 C11orf49Q9H6J7 331 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 COMMD8Q9NX08 183 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 LRRC42Q9Y546 428 aa12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.41
UBASH3A-209ENST00000635325 H3BNC9 293 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 PARNO95453 639 aaKnown RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 SEC24AO95486 1093 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 ELF1P32519 619 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 SGSHP51688 502 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CLCN5P51795 746 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 PRKAA2P54646 552 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 ACTR3P61158 418 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 PRAMEP78395 509 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CCDC6Q16204 474 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 LSM12Q3MHD2 195 aaKnown RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 FSCBQ5H9T9 825 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 TMEM198Q66K66 360 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 TMEM207Q6UWW9 146 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 PIM3Q86V86 326 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 DENND1CQ8IV53 801 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 C2orf15Q8WU43 125 aaKnown RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 TBATAQ96M53 351 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 PRICKLE1Q96MT3 831 aaPredicted RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 NACA2Q9H009 215 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 MFSD1Q9H3U5 465 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CYP4F11Q9HBI6 524 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 CYP4F12Q9HCS2 524 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
UBASH3A-209ENST00000635325 ZNF840PA6NDX5 716 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 F8W8V4 182 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 COCHO43405 550 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 ACSL4O60488 711 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 CIB2O75838 187 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 PDE5AO76074 875 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 UPP2O95045 317 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 KLKB1P03952 638 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 COX4I1P13073 169 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■■■□ 21.8
UBASH3A-209ENST00000635325 ITGAXP20702 1163 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 CDC25CP30307 473 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 SERPINB5P36952 375 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 RGRP47804 291 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 GNA12Q03113 381 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 PDCD2Q16342 344 aaPredicted RBP12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 TRMT5Q32P41 509 aaKnown RBP12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 C5orf22Q49AR2 442 aa12.5□□□□□ -0.41
UBASH3A-209ENST00000635325 TECRLQ5HYJ1 363 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms