RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CPEB1Q9BZB8 566 aaKnown RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 GLOD4Q9HC38 313 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 KLHL8Q9P2G9 620 aaPredicted RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 TRHDEQ9UKU6 1024 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 RRP9O43818 475 aaKnown RBP18.81■□□□□ 0.6
PNKP-224ENST00000631020 PHF2O75151 1096 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 GCATO75600 419 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 SEMA4FO95754 770 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 IL1BP01584 269 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 ETS1P14921 441 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 KCNA4P22459 653 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 ACSL1P33121 698 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 PIP4P1Q86T03 277 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 C1orf216Q8TAB5 229 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 SPATA13Q96N96 652 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 FERMT1Q9BQL6 677 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 GTPBP2Q9BX10 602 aaKnown RBP18.81■□□□□ 0.6
PNKP-224ENST00000631020 PABPC3Q9H361 631 aaKnown RBP18.81■□□□□ 0.6
PNKP-224ENST00000631020 SLC32A1Q9H598 525 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 NCKAP1Q9Y2A7 1128 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 CHD8Q9HCK8 2581 aa18.81■□□□□ 0.6
PNKP-224ENST00000631020 BCAT2O15382 392 aaPredicted RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 PIGNO95427 931 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 NFKB1P19838 968 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 MAOBP27338 520 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 PSMD8P48556 350 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 AP1S1P61966 158 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 CST6Q15828 149 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 POM121L1PQ3SYA9 428 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 CCDC137Q6PK04 289 aaKnown RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 PRPF39Q86UA1 669 aaKnown RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 FAM124AQ86V42 546 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 CAMK1DQ8IU85 385 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 MYRIPQ8NFW9 859 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 ATL2Q8NHH9 583 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 IMP4Q96G21 291 aaKnown RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 GORASP1Q9BQQ3 440 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 DDX47Q9H0S4 455 aaKnown RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 SLC25A51Q9H1U9 297 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 ANGPTL2Q9UKU9 493 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 FZD4Q9ULV1 537 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.8■□□□□ 0.6
PNKP-224ENST00000631020 PCDHGC4Q9Y5F7 938 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 MRFAP1Q9Y605 127 aa18.8■□□□□ 0.6
PNKP-224ENST00000631020 GOLGA6L10A0A0M3HER8 536 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 F5H423 210 aaPredicted RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 ZNF189O75820 626 aaPredicted RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 STK10O94804 968 aaKnown RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 PRNPP04156 253 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 ZSCAN5DPP0CG00 497 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 SLC8A1P32418 973 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 SKOR1P84550 965 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 RAD51Q06609 339 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 RALGPS1Q5JS13 557 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 GDPD4Q6W3E5 623 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 DSG4Q86SJ6 1040 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 ZCCHC9Q8N567 271 aaKnown RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 SPATA4Q8NEY3 305 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 SPATA22Q8NHS9 363 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 TADA1Q96BN2 335 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 LRIG1Q96JA1 1093 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 TUBGCP5Q96RT8 1024 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.67e-9■■■□□ 16.1
PNKP-224ENST00000631020 C6orf106Q9H6K1 298 aaPredicted RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 EIF2B4Q9UI10 523 aaKnown RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 PLK4O00444 970 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 TRAFD1O14545 582 aaPredicted RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 MID1O15344 667 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 IFNB1P01574 187 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 UGT2B4P06133 528 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 CES1P23141 567 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 CD86P42081 329 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 GRIK2Q13002 908 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 IL27RAQ6UWB1 636 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 ZNF572Q7Z3I7 529 aaPredicted RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 AADATQ8N5Z0 425 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 ARRDC3Q96B67 414 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 KLHL32Q96NJ5 620 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 FCRL5Q96RD9 977 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 MIR1-1HGQ9H1L0 117 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 GBA3Q9H227 469 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 FSCN3Q9NQT6 498 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 HAUS2Q9NVX0 235 aa18.79■□□□□ 0.6
PNKP-224ENST00000631020 TPX2Q9ULW0 747 aaKnown RBP18.79■□□□□ 0.6
PNKP-224ENST00000631020 KPNA3O00505 521 aaPredicted RBP18.78■□□□□ 0.6
PNKP-224ENST00000631020 GIPC1O14908 333 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 METTL18O95568 372 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 MT-CYBP00156 380 aaPredicted RBP18.78■□□□□ 0.6
PNKP-224ENST00000631020 ADH1BP00325 375 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 ZNF883P0CG24 379 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 C5AR1P21730 350 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 RPL22P35268 128 aaKnown RBP18.78■□□□□ 0.6
PNKP-224ENST00000631020 DRD3P35462 400 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 FNTAP49354 379 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 AFF3P51826 1226 aaKnown RBP18.78■□□□□ 0.6
PNKP-224ENST00000631020 BCL2L1Q07817 233 aa18.78■□□□□ 0.6
PNKP-224ENST00000631020 TRAF2Q12933 501 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms