RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 RRM1P23921 792 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 CLCN5P51795 746 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 CDH15P55291 814 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 BNC1Q01954 994 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 EEF1A2Q05639 463 aaKnown RBP3.38□□□□□ -1.87
SRP54-214ENST00000630962 DLG1Q12959 904 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 NFIL3Q16649 462 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 SOWAHAQ2M3V2 549 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 AMZ1Q400G9 498 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 ATP13A5Q4VNC0 1218 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 ESCO2Q56NI9 601 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 ZC3HC1Q86WB0 502 aaKnown RBP3.38□□□□□ -1.87
SRP54-214ENST00000630962 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 AGBL3Q8NEM8 1001 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 PPM1EQ8WY54 764 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 HERVK_113Q902F9 699 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 LMLNQ96KR4 655 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 IL17FQ96PD4 163 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 SIN3AQ96ST3 1273 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 EYA3Q99504 573 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 SH3GL2Q99962 352 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 CLSTN3Q9BQT9 956 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 H2AFJQ9BTM1 129 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 UBTD1Q9HAC8 227 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 VDAC3Q9Y277 283 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 NFE2L3Q9Y4A8 694 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 A3GALT2U3KPV4 340 aa3.38□□□□□ -1.87
SRP54-214ENST00000630962 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
SRP54-214ENST00000630962 HSPA12AO43301 675 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 BUB3O43684 328 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 RFPL2O75678 378 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 RGS11O94810 467 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 MT-CYBP00156 380 aaPredicted RBP3.37□□□□□ -1.87
SRP54-214ENST00000630962 MMP2P08253 660 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 MCM3P25205 808 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 ITGB8P26012 769 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 EFNB1P98172 346 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 BIRC3Q13489 604 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 TCTN1Q2MV58 587 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 ZNF718Q3SXZ3 478 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 ZNF766Q5HY98 468 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 RHBDF2Q6PJF5 856 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 GSG1LQ6UXU4 331 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 CCNI2Q6ZMN8 369 aaPredicted RBP3.37□□□□□ -1.87
SRP54-214ENST00000630962 TUBA1AQ71U36 451 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 LRRTM4Q86VH4 590 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 PARP16Q8N5Y8 322 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 NR4A3Q92570 626 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 USP13Q92995 863 aaPredicted RBP3.37□□□□□ -1.87
SRP54-214ENST00000630962 INPP4AQ96PE3 977 aaPredicted RBP3.37□□□□□ -1.87
SRP54-214ENST00000630962 EPYCQ99645 322 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 TUBA1CQ9BQE3 449 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 MXRA8Q9BRK3 442 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 SLC32A1Q9H598 525 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 GAREM1Q9H706 876 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 C17orf75Q9HAS0 396 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 PCDH9Q9HC56 1237 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 ZNF224Q9NZL3 707 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 TBX20Q9UMR3 447 aa3.37□□□□□ -1.87
SRP54-214ENST00000630962 IGHV4OR15-8A0A075B7B6 117 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 hDV102S1A0JD36 115 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 IFITM10A6NMD0 228 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 HSPB2A8KAH6 182 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 LINC01565O15544 149 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 EIF3JO75822 258 aaKnown RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 HEXAP06865 529 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 COX7A2P14406 83 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 HNRNPH1P31943 449 aaKnown RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 IL15P40933 162 aaPredicted RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 PPM1FP49593 454 aaPredicted RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 PDLIM4P50479 330 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 TRPC3Q13507 836 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 DHX34Q14147 1143 aaKnown RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 OASLQ15646 514 aaKnown RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 HSPB2Q16082 182 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 CCDC6Q16204 474 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 SYT16Q17RD7 645 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 FAM69BQ5VUD6 431 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 TMEM81Q6P7N7 255 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.36□□□□□ -1.87
SRP54-214ENST00000630962 MOB3CQ70IA8 216 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 LINGO2Q7L985 606 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 GPAT4Q86UL3 456 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 SFR1Q86XK3 245 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 ZNF354CQ86Y25 554 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 FOXP4Q8IVH2 680 aaPredicted RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 PGBD5Q8N414 524 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 ZCCHC9Q8N567 271 aaKnown RBP3.36□□□□□ -1.87
SRP54-214ENST00000630962 LMNTD1Q8N9Z9 388 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 ARRDC2Q8TBH0 407 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 WFIKKN2Q8TEU8 576 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 SCMH1Q96GD3 660 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 KXD1Q9BQD3 176 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 EVA1AQ9H8M9 152 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 FKRPQ9H9S5 495 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 PPCSQ9HAB8 311 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 EBF2Q9HAK2 575 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms