RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	TMC5	Q6UXY8	1006 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PPP2R3C	Q969Q6	453 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PLD4	Q96BZ4	506 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PGAP3	Q96FM1	320 aa	Predicted RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	VWA7	Q9Y334	891 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	GOLGA4	Q13439	2230 aa	Known RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PLIN3	O60664	434 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	ZMPSTE24	O75844	475 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PRKCH	P24723	683 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PBLD	P30039	288 aa	Predicted RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	MC4R	P32245	332 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	SLC26A7	Q8TE54	656 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	RTP4	Q96DX8	246 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	PHACTR1	Q9C0D0	580 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	ASB8	Q9H765	288 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	CASS4	Q9NQ75	786 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	INSIG1	O15503	277 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	SH3BP5	O60239	455 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	TMCC1	O94876	653 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	LPO	P22079	712 aa	Predicted RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	SERPINA4	P29622	427 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	HOXC8	P31273	242 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	RGS4	P49798	205 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	CDH13	P55290	713 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	AARS2	Q5JTZ9	985 aa	Known RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	SIRPB2	Q5JXA9	342 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	SH3RF2	Q8TEC5	729 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	MRPL46	Q9H2W6	279 aa	Known RBP	13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	INSL6	Q9Y581	213 aa		13.37	□□□□□ -0.27
NRXN1-233	ENST00000630543	POU4F1	Q01851	419 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	UBAP2L	Q14157	1087 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	IMPG1	Q17R60	797 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TEDDM1	Q5T9Z0	273 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	DET1	Q7L5Y6	550 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CMTM8	Q8IZV2	173 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TMEM248	Q9NWD8	314 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	COPG2	Q9UBF2	871 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	KLHL2	O95198	593 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	GOT2	P00505	430 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	LTA4H	P09960	611 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	ATF6	P18850	670 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	HNRNPH1	P31943	449 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	FAM189B	P81408	668 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CREM	Q03060	361 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CAMK1D	Q8IU85	385 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	NAT14	Q8WUY8	206 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CLSTN3	Q9BQT9	956 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CD248	Q9HCU0	757 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TCF7L2	Q9NQB0	619 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	ABCB8	Q9NUT2	735 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TMEM51	Q9NW97	253 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	FAF1	Q9UNN5	650 aa	Predicted RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	DICER1	Q9UPY3	1922 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TMEM189-UBE2V1	I3L0A0	370 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	RFPL2	O75678	378 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	POLR2E	P19388	210 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	GK	P32189	559 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	MSANTD2	Q6P1R3	559 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TUBGCP3	Q96CW5	907 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	SYTL2	Q9HCH5	934 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	VPS9D1	Q9Y2B5	631 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	AHSG	P02765	367 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	UGT2B4	P06133	528 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	NUDT2	P50583	147 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	CDK7	P50613	346 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	PLIN5	Q00G26	463 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	RGS9BP	Q6ZS82	235 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	LCA5	Q86VQ0	697 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	TEX9	Q8N6V9	391 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	NT5C3B	Q969T7	300 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	PPWD1	Q96BP3	646 aa	Known RBP	13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	SUN2	Q9UH99	717 aa		13.36	□□□□□ -0.27
NRXN1-233	ENST00000630543	NEMP2	A6NFY4	417 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ENO4	A6NNW6	628 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	STC2	O76061	302 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	HMOX2	P30519	316 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	CLCN5	P51795	746 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	COPA	P53621	1224 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	SERINC3	Q13530	473 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	SYTL3	Q4VX76	610 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	HECTD2	Q5U5R9	776 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	SMYD5	Q6GMV2	418 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	MOCOS	Q96EN8	888 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	FETUB	Q9UGM5	382 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ANKRD6	Q9Y2G4	727 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TP73	O15350	636 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TYROBP	O43914	113 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	KATNA1	O75449	491 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TPBGL	P0DKB5	382 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	MZF1	P28698	734 aa	Predicted RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	EPHA3	P29320	983 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TMED1	Q13445	227 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	BOP1	Q14137	746 aa	Known RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	LRRC36	Q1X8D7	754 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	LRRC8E	Q6NSJ5	796 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	PIGW	Q7Z7B1	504 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	SMG7	Q92540	1137 aa	Known RBP	13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ATP13A3	Q9H7F0	1226 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	TLE6	Q9H808	572 aa		13.35	□□□□□ -0.27
NRXN1-233	ENST00000630543	ATP6AP2	A0A1C7CYW4	349 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms