RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 RIPOR3Q96MK2 946 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRIB3Q96RU7 358 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 FAM83CQ9BQN1 747 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 DHRS4Q9BTZ2 278 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 KIFC1Q9BW19 673 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 SLC2A11Q9BYW1 496 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 TM6SF2Q9BZW4 377 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 STMN4Q9H169 189 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 EBF3Q9H4W6 596 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARNT2Q9HBZ2 717 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 THG1LQ9NWX6 298 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 MOCS1Q9NZB8 636 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 PSMC3IPQ9P2W1 217 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 SLC25A13Q9UJS0 675 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 TCAF1Q9Y4C2 921 aa10.02□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRANK1O15050 2925 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CXorf51AA0A1B0GTR3 108 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZCWPW2A0A1B0GU75 182 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 A0A1W2PPC1 479 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CCDC78A2IDD5 438 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 FAM159BA6NKW6 160 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 FOXO6A8MYZ6 492 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 HOXC11O43248 304 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 NDST3O95803 873 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 EPOP01588 193 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 FGF1P05230 155 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 INHBAP08476 426 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CISD3P0C7P0 127 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SRCP12931 536 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 HLA-DPA1P20036 260 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 NR1D1P20393 614 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 IGFBP4P22692 258 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 ADRA1DP25100 572 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 ATP5DP30049 168 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 HPDP32754 393 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MTHFRP42898 656 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 STK19P49842 368 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SULT2A1Q06520 285 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRAF2Q12933 501 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MSLNQ13421 630 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SEPT6Q14141 434 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 GRM2Q14416 872 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 PDGFRLQ15198 375 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 RASA2Q15283 850 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SMAD1Q15797 465 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 GEN1Q17RS7 908 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 RALGPS1Q5JS13 557 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MBLAC2Q68D91 279 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 VITQ6UXI7 678 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CYS1Q717R9 158 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CYP2U1Q7Z449 544 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 KIAA0907Q7Z7F0 614 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 ADIPOR2Q86V24 386 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 EXOC3L1Q86VI1 746 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 C12orf40Q86WS4 652 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 AHI1Q8N157 1196 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SIX5Q8N196 739 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 SLC44A1Q8WWI5 657 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 TTC17Q96AE7 1141 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 E2F7Q96AV8 911 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CERS2Q96G23 380 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MSLNLQ96KJ4 702 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZNF778Q96MU6 729 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 RANBP9Q96S59 729 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 KXD1Q9BQD3 176 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 TDRD1Q9BXT4 1180 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 PLA2G2FQ9BZM2 168 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 TNKS2Q9H2K2 1166 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 POMKQ9H5K3 350 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 PPANQ9NQ55 473 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 HPS4Q9NQG7 708 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 IL1RAPL1Q9NZN1 696 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 EVLQ9UI08 416 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 FBXO10Q9UK96 956 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 CHKBQ9Y259 395 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 PCDHGC4Q9Y5F7 938 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 RAI2Q9Y5P3 530 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 IKBKGQ9Y6K9 419 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 FAM169AQ9Y6X4 670 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 MIA3Q5JRA6 1907 aa10.01□□□□□ -0.81
SOX2-OT-244ENST00000627738 HEATR9A2RTY3 570 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 OTOL1A6NHN0 477 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-244ENST00000627738 UGT1A9O60656 530 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 LILRA1O75019 489 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 TULP3O75386 442 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZNF821O75541 412 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-244ENST00000627738 FAM155BO75949 473 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZIC2O95409 532 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-244ENST00000627738 IGSF6O95976 241 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 PRLP01236 227 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 PRKCGP05129 697 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 ERVK-10P10266 1014 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 LAMP2P13473 410 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 ALADP13716 330 aa10□□□□□ -0.81
SOX2-OT-244ENST00000627738 KRT15P19012 456 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms