RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 C6orf106Q9H6K1 298 aaPredicted RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 USP29Q9HBJ7 922 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 FSCN3Q9NQT6 498 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 SLCO1B1Q9Y6L6 691 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 RALGAPA1Q6GYQ0 2036 aa14.83□□□□□ -0.03
PNKP-221ENST00000627317 C5orf60A6NFR6 353 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 C16orf96A6NNT2 1141 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 C4orf47A7E2U8 309 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 F5H423 210 aaPredicted RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 SLC7A4O43246 635 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 IFNB1P01574 187 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ITGAVP06756 1048 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ENGP17813 658 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 STIP1P31948 543 aaKnown RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 ACTN2P35609 894 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 NIPAL4Q0D2K0 466 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 TRAF2Q12933 501 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 WDR45BQ5MNZ6 344 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ANKRD20A2Q5SQ80 823 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ANKRD20A1Q5TYW2 823 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ANKRD20A3Q5VUR7 823 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 DRICH1Q6PGQ1 229 aaPredicted RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 BRAT1Q6PJG6 821 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 GSTA5Q7RTV2 222 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 CCDC89Q8N998 374 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 OR14C36Q8NHC7 312 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ARRDC2Q8TBH0 407 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 CCDC110Q8TBZ0 833 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 IMP4Q96G21 291 aaKnown RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.04
PNKP-221ENST00000627317 GBA3Q9H227 469 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 NEUROG2Q9H2A3 272 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 SGK2Q9HBY8 427 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 TMEM9BQ9NQ34 198 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 DKK3Q9UBP4 350 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 RNF14Q9UBS8 474 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.83□□□□□ -0.04
PNKP-221ENST00000627317 PCDHGC4Q9Y5F7 938 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 RAI2Q9Y5P3 530 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 ANKRD36A6QL64 1941 aa14.83□□□□□ -0.04
PNKP-221ENST00000627317 CEP295Q9C0D2 2601 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 A0A1W2PQ67 120 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 TSPAN11A1L157 253 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 LRRC72A6NJI9 287 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 PHF2O75151 1096 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 SEMA4FO95754 770 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 CPP00450 1065 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 CFIP05156 583 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 ADRB3P13945 408 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 MAOBP27338 520 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 CD68P34810 354 aaPredicted RBP14.82□□□□□ -0.04
PNKP-221ENST00000627317 TNNT3P45378 269 aaPredicted RBP14.82□□□□□ -0.04
PNKP-221ENST00000627317 ADPRHP54922 357 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 GDF10P55107 478 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 SYCP2LQ5T4T6 812 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 PIP5KL1Q5T9C9 394 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 ARMC12Q5T9G4 340 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 AGBL4Q5VU57 503 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 CREG2Q8IUH2 290 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 HCAR2Q8TDS4 363 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 VOPP1Q96AW1 172 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 RTP4Q96DX8 246 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 NSMCE3Q96MG7 304 aa14.82□□□□□ -0.04
PNKP-221ENST00000627317 NUSAP1Q9BXS6 441 aaKnown RBP14.82□□□□□ -0.04
PNKP-221ENST00000627317 NUMA1Q14980 2115 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 FAM47DPA6NHR8 397 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 MEI4A8MW99 385 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 UPK3BL1B0FP48 263 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 UPK3BL2E5RIL1 263 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 TRAFD1O14545 582 aaPredicted RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 HTRA2O43464 458 aaPredicted RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 GCATO75600 419 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PGLSO95336 258 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 IGHV4-34P06331 123 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 MMP2P08253 660 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PSMB4P28070 264 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 KCNJ1P48048 391 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 SUOXP51687 545 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 POLR2LP62875 67 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 SKOR1P84550 965 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 BNC1Q01954 994 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PRPSAP1Q14558 356 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 SLC14A2Q15849 920 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PCSK7Q16549 785 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 CYP1B1Q16678 543 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 P3H1Q32P28 736 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PPM1JQ5JR12 505 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 LRRC73Q5JTD7 316 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 TTC7BQ86TV6 843 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PRPF39Q86UA1 669 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
PNKP-221ENST00000627317 SPATA22Q8NHS9 363 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 RAB7BQ96AH8 199 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 ECHDC3Q96DC8 303 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 PPP1R2P1Q96PQ5 205 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 FCRL5Q96RD9 977 aa14.81□□□□□ -0.04
PNKP-221ENST00000627317 TDRD1Q9BXT4 1180 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms