RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 PAPSS1O43252 624 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 ULK1O75385 1050 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 BANF1O75531 89 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 LDLRP01130 860 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 CAP1Q01518 475 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 MTAPQ13126 283 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 ARPINQ7Z6K5 226 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 C2orf73Q8N5S3 287 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 KCTD4Q8WVF5 259 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 ANKRD7Q92527 254 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 WRAP53Q9BUR4 548 aaKnown RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 TLR10Q9BXR5 811 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 AGO3Q9H9G7 860 aaKnown RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 NOD2Q9HC29 1040 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 COG5Q9UP83 839 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 AP3M1Q9Y2T2 418 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 hCG_1818297A0A087WSY0 165 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 RHPN2P1A8MT19 583 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 ATG13O75143 517 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 OTCP00480 354 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 ITGAVP06756 1048 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 CXCR3P49682 368 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 COX10Q12887 443 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 SF1Q15637 639 aaKnown RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 CDC73Q6P1J9 531 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 GPRIN3Q6ZVF9 776 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 PPP3R2Q96LZ3 170 aa11.43□□□□□ -0.58
CLIP1-219ENST00000620786 NIFKQ9BYG3 293 aaKnown RBP11.43□□□□□ -0.58
CLIP1-219ENST00000620786 RPL17P18621 184 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 IDSP22304 550 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 LRPAP1P30533 357 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 RPL4P36578 427 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 NAA20P61599 178 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 RPL7AP62424 266 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 MIIPQ5JXC2 388 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 OLFML2BQ68BL8 750 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CCDC103Q8IW40 242 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SPATA6LQ8N4H0 392 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 POU5F2Q8N7G0 328 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SHC3Q92529 594 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 RXFP1Q9HBX9 757 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CYLDQ9NQC7 956 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CD84Q9UIB8 345 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 OR6B1O95007 311 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 EOMESO95936 686 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ALAS2P22557 587 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ATP5F1P24539 256 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 WNT3AP56704 352 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 GAD2Q05329 585 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 MBTD1Q05BQ5 628 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CCL14Q16627 93 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 EML3Q32P44 896 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF605Q86T29 641 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ARL14EPQ8N8R7 260 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 DTNBP1Q96EV8 351 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FEM1CQ96JP0 617 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FAM84AQ96KN4 292 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SEZ6LQ9BYH1 1024 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 REEP1Q9H902 201 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 STMN3Q9NZ72 180 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 KCNE2Q9Y6J6 123 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 COLEC10Q9Y6Z7 277 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 BCL9LQ86UU0 1499 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 BCLAF3A2AJT9 711 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 DCXO43602 365 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 KLRC4O43908 158 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 KRT75O95678 551 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CCL5P13501 91 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 PIK3R1P27986 724 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SP2Q02086 613 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CTBP1Q13363 440 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 INAQ16352 499 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 LINGO4Q6UY18 593 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 LRRC55Q6ZSA7 311 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 HDHD2Q9H0R4 259 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ELOVL2Q9NXB9 296 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 WBP4O75554 376 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 TSPAN8P19075 237 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF280AP59817 542 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 MEA1Q16626 185 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 APTXQ7Z2E3 356 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 RNF148Q8N7C7 305 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CDYL2Q8N8U2 506 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 OR4A15Q8NGL6 344 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ZMAT2Q96NC0 199 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 EPB41L4BQ9H329 900 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms