RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ANKRD13AQ8IZ07 590 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF398Q8TD17 642 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 OR52B2Q96RD2 323 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 NODALQ96S42 347 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 RBBP8Q99708 897 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 BCAS3Q9H6U6 928 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CCL22O00626 93 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 HAT1O14929 419 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 NDUFB10O96000 172 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 LIPEQ05469 1076 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ATAD3CQ5T2N8 411 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 KYAT3Q6YP21 454 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF671Q8TAW3 534 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SLC25A23Q9BV35 468 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TMEM8AQ9HCN3 771 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SH3BP4Q9P0V3 963 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PFDN2Q9UHV9 154 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TBC1D24Q9ULP9 559 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 RNASEH2AO75792 299 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 RFX5P48382 616 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF829Q3KNS6 432 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FIGNQ5HY92 759 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PTCHD4Q6ZW05 846 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 B3GALNT2Q8NCR0 500 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 LATS2Q9NRM7 1088 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 IQSEC2Q5JU85 1478 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 EI24O14681 340 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CYP3A4P08684 503 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CCNYL3P0C7X3 344 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 EFNA1P20827 205 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ARL13BQ3SXY8 428 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF621Q6ZSS3 439 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ASRGL1Q7L266 308 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 APTXQ7Z2E3 356 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FAM160B2Q86V87 743 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 C1QTNF1Q9BXJ1 281 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 VPS33BQ9H267 617 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 VPS28Q9UK41 221 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 GAKO14976 1311 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 H0YCG3 227 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 NRP1O14786 923 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CD36P16671 472 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TOR1AIP1Q5JTV8 583 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ENOSF1Q7L5Y1 443 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 IGDCC3Q8IVU1 814 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 IRGQQ8WZA9 623 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 UGT2B28Q9BY64 529 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ACTR8Q9H981 624 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZSCAN32Q9NX65 697 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 LGALS13Q9UHV8 139 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SHOC2Q9UQ13 582 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 GJA3Q9Y6H8 435 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 MOXD2PA6NHM9 499 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 H3BMQ9 156 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 KCNA6P17658 529 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 HDCP19113 662 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FRMPD4Q14CM0 1322 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CUZD1Q86UP6 607 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ATPAF2Q8N5M1 289 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TRIM43Q96BQ3 446 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 COG8Q96MW5 612 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 IGSF9Q9P2J2 1179 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 A0A1W2PQ67 120 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 RFX1P22670 979 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CLK2P49760 499 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FSCN1Q16658 493 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 GFOD2Q3B7J2 385 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PARP10Q53GL7 1025 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TPRG1LQ5T0D9 272 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PRMT9Q6P2P2 845 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 DPY19L3Q6ZPD9 716 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ELAC1Q9H777 363 aaKnown RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SP110Q9HB58 689 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 UBA2Q9UBT2 640 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PRDM15P57071 1507 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TREHO43280 583 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TPST2O60704 377 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 NFKB1P19838 968 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 NCS1P62166 190 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZRANB3Q5FWF4 1079 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZFP82Q8N141 532 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FAM83FQ8NEG4 500 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PPP1R13LQ8WUF5 828 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SLC35C1Q96A29 364 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 PCDHA11Q9Y5I1 949 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 M0R036 132 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 KPNA3O00505 521 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 SNAP29O95721 258 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 CST1P01037 141 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TGM4P49221 684 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 DUOXA2Q1HG44 320 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 GRTP1Q5TC63 336 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF572Q7Z3I7 529 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-214ENST00000620676 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 FLAD1Q8NFF5 587 aa5.06□□□□□ -1.6
VPS13D-214ENST00000620676 TSPAN17Q96FV3 270 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms