RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CD300LFQ8TDQ1 290 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ACSF2Q96CM8 615 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 NCAM2O15394 837 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 KCNQ3O43525 872 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 OR10H3O60404 316 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ITGA4P13612 1032 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 MMP13P45452 471 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ABCG1P45844 678 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 LRRN1Q6UXK5 716 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 OR14K1Q8NGZ2 314 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 RCN3Q96D15 328 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 SERAC1Q96JX3 654 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 MBOAT7Q96N66 472 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 EGFL7Q9UHF1 273 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 URGCPQ8TCY9 931 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 ARL5BQ96KC2 179 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 DENND2DQ9H6A0 471 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 TFRCP02786 760 aaKnown RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 LTFP02788 710 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 RPTORQ8N122 1335 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 AURKAO14965 403 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 FAAP100Q0VG06 881 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 TSGA10IPQ3SY00 556 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 REEP2Q9BRK0 252 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 PLA2G4CQ9UP65 541 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 RRN3P2A6NIE6 340 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 GSTT2P0CG29 244 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 NMT1P30419 496 aaKnown RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 SLC6A4P31645 630 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 ARL4DP49703 201 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 ACVR2BQ13705 512 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 SNX20Q7Z614 316 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 HSPA12BQ96MM6 686 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 LNPEPQ9UIQ6 1025 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 SAMD4AQ9UPU9 718 aaKnown RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 MAN2B2Q9Y2E5 1009 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 HIF3AQ9Y2N7 669 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 POLR3HQ9Y535 204 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 MUTP22033 750 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 NFE2L1Q14494 772 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 MOGQ16653 247 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 GPRC6AQ5T6X5 926 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 GALNT5Q7Z7M9 940 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 PHACTR4Q8IZ21 702 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 OR2L5Q8NG80 312 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF302Q9NR11 478 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 IGSF9Q9P2J2 1179 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 RBP5P82980 135 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 COLEC12Q5KU26 742 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 FLAD1Q8NFF5 587 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
COL5A1-208ENST00000618395 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
COL5A1-208ENST00000618395 BBIP1A8MTZ0 92 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 SRCP12931 536 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 CDK8P49336 464 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 ADAM15Q13444 863 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 BATFQ16520 125 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 NADK2Q4G0N4 442 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 UBXN11Q5T124 520 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 RMDN3Q96TC7 470 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 LGR6Q9HBX8 967 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 CD320Q9NPF0 282 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 IFT46Q9NQC8 304 aa15.08■□□□□ 0.01
COL5A1-208ENST00000618395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.08■□□□□ 0.01
COL5A1-208ENST00000618395 CYP1A1P04798 512 aaPredicted RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 PCCAP05165 728 aaPredicted RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 MOGSQ13724 837 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 MILR1Q7Z6M3 343 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 ANGPT4Q9Y264 503 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 BCS1LQ9Y276 419 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 N6AMT1Q9Y5N5 214 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 XDHP47989 1333 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 FXYD6-FXYD2A0A087WZ82 144 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 NUDT17P0C025 328 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 CSH1P0DML2 217 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 CSH2P0DML3 217 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 CDKN2CP42773 168 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 TMEM132DQ14C87 1099 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 FXYD6Q9H0Q3 95 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 TBC1D13Q9NVG8 400 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 KCTD5Q9NXV2 234 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 PRMT5O14744 637 aaPredicted RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 OXSR1O95747 527 aaPredicted RBP15.08■□□□□ 0
COL5A1-208ENST00000618395 IFNA10P01566 189 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 HMGCRP04035 888 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 IFNA4P05014 189 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 USP17L8P0C7I0 530 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 CCNB1P14635 433 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 ALLCQ8N6M5 410 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 ETNPPLQ8TBG4 499 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 FATE1Q969F0 183 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 PCDHA3Q9Y5H8 950 aa15.08■□□□□ 0
COL5A1-208ENST00000618395 PGLSO95336 258 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms