RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 NIPA2Q8N8Q9 360 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 TP53I13Q8NBR0 393 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-218ENST00000617172 NETO2Q8NC67 525 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
TARDBP-218ENST00000617172 WDR48Q8TAF3 677 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 NSMCE1Q8WV22 266 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 SPOCK2Q92563 424 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 NAT6Q93015 286 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 ECHDC3Q96DC8 303 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 DEPDC7Q96QD5 511 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 TRIM7Q9C029 511 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 MBNL1Q9NR56 388 aaKnown RBP9.75□□□□□ -0.85
TARDBP-218ENST00000617172 KCTD5Q9NXV2 234 aa9.75□□□□□ -0.85
TARDBP-218ENST00000617172 APOBEC3BQ9UH17 382 aaKnown RBP9.75□□□□□ -0.85
TARDBP-218ENST00000617172 GOLGA4Q13439 2230 aaKnown RBP9.75□□□□□ -0.85
TARDBP-218ENST00000617172 PLXNB3Q9ULL4 1909 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 FAM208BQ5VWN6 2430 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 TRPM6Q9BX84 2022 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 EME2A4GXA9 379 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 CYP1A2P05177 515 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ALPIP09923 528 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 RARAP10276 462 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 C6P13671 934 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 CTSEP14091 401 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ITIH2P19823 946 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 KELP23276 732 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 IL1R2P27930 398 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 MMP12P39900 470 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 SCNN1BP51168 640 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 HK3P52790 923 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ADKP55263 362 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 MTM1Q13496 603 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ZNF235Q14590 738 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 INPP5AQ14642 412 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 IRF4Q15306 451 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 NFKBIBQ15653 356 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 HADHQ16836 314 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 WSCD2Q2TBF2 565 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 COL28A1Q2UY09 1125 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 DEFB133Q30KQ1 61 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 TPRG1LQ5T0D9 272 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 CDCP2Q5VXM1 449 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ESRP1Q6NXG1 681 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ALKBH5Q6P6C2 394 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 KDM7AQ6ZMT4 941 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 NPWQ8N729 165 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 IFI44Q8TCB0 444 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 MAPK15Q8TD08 544 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 HSPH1Q92598 858 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 FGF11Q92914 225 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 APOOQ9BUR5 198 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 BOCQ9BWV1 1114 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 RCOR3Q9P2K3 495 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 LCMT1Q9UIC8 334 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 DOLKQ9UPQ8 538 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.74□□□□□ -0.858e-12■□□□□ 8.9
TARDBP-218ENST00000617172 DSPP15924 2871 aaKnown RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ANKRD11Q6UB99 2663 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-218ENST00000617172 PTPRBP23467 1997 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 CHD5Q8TDI0 1954 aa9.74□□□□□ -0.85
TARDBP-218ENST00000617172 ARID1BQ8NFD5 2236 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 A0A087X0T9 212 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CPED1A4D0V7 1026 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 PDE2AO00408 941 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 TRAFD1O14545 582 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 YY2O15391 372 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 GCATO75600 419 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 TCEA3O75764 348 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 RASGRP1O95267 797 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 HOXC4P09017 264 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 ELFN1P0C7U0 828 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 FAM228BP0C875 321 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 KRT10P13645 584 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 TSHRP16473 764 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 AMPD1P23109 780 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 EIF2S3P41091 472 aaKnown RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 RGRP47804 291 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CDH6P55285 790 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CLDN6P56747 220 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 SRP54P61011 504 aaKnown RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 SLC10A7Q0GE19 358 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 NFATC4Q14934 902 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CDKN3Q16667 212 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 SMTNL2Q2TAL5 461 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 SKOR2Q2VWA4 1001 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 MARC1Q5VT66 337 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 ENPP7Q6UWV6 458 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 PDZD3Q86UT5 571 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 GKN2Q86XP6 184 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 HID1Q8IV36 788 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms