RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, human

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS3-208	ENST00000616449	ITGB1	P05556	798 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	HARS2	P49590	506 aa	Known RBP	12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	TAF10	Q12962	218 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	MAPRE1	Q15691	268 aa	Known RBP	12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	TIGD2	Q4W5G0	525 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	GLT6D1	Q7Z4J2	308 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	SPPL2C	Q8IUH8	684 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	TMEM86A	Q8N2M4	240 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	THAP11	Q96EK4	314 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	ANKRD27	Q96NW4	1050 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	SERPINB11	Q96P15	392 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	KCNA7	Q96RP8	456 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	CNTN3	Q9P232	1028 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	PCDHGC4	Q9Y5F7	938 aa		12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	COPG1	Q9Y678	874 aa	Known RBP	12.83	□□□□□ -0.36
ACSS3-208	ENST00000616449	TTC3	P53804	2025 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	DNAJC25-GNG10	A0A024R161	153 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	SNRPB2	P08579	225 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	UGT1A6	P19224	532 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	PPID	Q08752	370 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	NAT16	Q8N8M0	369 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	SMG8	Q8ND04	991 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	MRPL57	Q9BQC6	102 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	SORCS3	Q9UPU3	1222 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	DERA	Q9Y315	318 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ARHGAP10	A1A4S6	786 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449		H3BMM5	538 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	PDLIM1	O00151	329 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	KLF11	O14901	512 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	PRSS56	P0CW18	603 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CD68	P34810	354 aa	Predicted RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CDH15	P55291	814 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	LIN52	Q52LA3	116 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	DCLRE1A	Q6PJP8	1040 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ZYG11A	Q6WRX3	759 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	RALGPS2	Q86X27	583 aa	Predicted RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	DENND1C	Q8IV53	801 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CNTD1	Q8N815	330 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ENDOV	Q8N8Q3	282 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	RP9	Q8TA86	221 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	VPS33A	Q96AX1	596 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	FAXDC2	Q96IV6	333 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	GLT1D1	Q96MS3	346 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	RTKN	Q9BST9	563 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	VRTN	Q9H8Y1	702 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ZFYVE28	Q9HCC9	887 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ZFP14	Q9HCL3	533 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	OXSM	Q9NWU1	459 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	DNAJC28	Q9NX36	388 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	NDUFAF1	Q9Y375	327 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	TCAF1	Q9Y4C2	921 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ACTL7A	Q9Y615	435 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	MYO1G	B0I1T2	1018 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	SYNCRIP	O60506	623 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	GPR32	O75388	356 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	OXCT1	P55809	520 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	IL23R	Q5VWK5	629 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	OFCC1	Q8IZS5	231 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	TXNDC5	Q8NBS9	432 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CATSPER1	Q8NEC5	780 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	TRIM62	Q9BVG3	475 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	LIN28A	Q9H9Z2	209 aa	Known RBP	12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	CYLD	Q9NQC7	956 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	TMLHE	Q9NVH6	421 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	VTI1B	Q9UEU0	232 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	ZNHIT2	Q9UHR6	403 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	VPS28	Q9UK41	221 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	PSMD13	Q9UNM6	376 aa		12.82	□□□□□ -0.36
ACSS3-208	ENST00000616449	COL1A2	P08123	1366 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	SLCO1B7	G3V0H7	640 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	PRRG1	O14668	218 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	TOMM70	O94826	608 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	CLIC3	O95833	236 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	ATP6V1B2	P21281	511 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	PSMA4	P25789	261 aa	Known RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	WEE1	P30291	646 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	NAB1	Q13506	487 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	LAMB3	Q13751	1172 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	PLCL1	Q15111	1095 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	INSC	Q1MX18	579 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	GDF6	Q6KF10	455 aa	Predicted RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	LPCAT2	Q7L5N7	544 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	HERC6	Q8IVU3	1022 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	OR4K2	Q8NGD2	314 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	CLHC1	Q8NHS4	586 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	FIG4	Q92562	907 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	TRIM15	Q9C019	465 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	CIDEB	Q9UHD4	219 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449		E7ENX8	843 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	CCNT2	O60583	730 aa	Known RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	H2AFY	O75367	372 aa	Known RBP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	RHOC	P08134	193 aa		12.81	□□□□□ -0.36
ACSS3-208	ENST00000616449	MYL4	P12829	197 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms