RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SF3B4Q15427 424 aaKnown RBP eCLIP13.25□□□□□ -0.29
MSH6-214ENST00000616033 SLC10A6Q3KNW5 377 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ZNF470Q6ECI4 717 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 CAMK1DQ8IU85 385 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 TFAP2CQ92754 450 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 RNF145Q96MT1 663 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.25□□□□□ -0.292e-7■■■■□ 21.4
MSH6-214ENST00000616033 SQORQ9Y6N5 450 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 H3BMM5 538 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PSMD11O00231 422 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ACKR2O00590 384 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 B4GALT4O60513 344 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 GMNNO75496 209 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 PGK1P00558 417 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PSMA4P25789 261 aaKnown RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 IER5Q5VY09 327 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PSTKQ8IV42 348 aaKnown RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 CENPLQ8N0S6 344 aaPredicted RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 CNTD1Q8N815 330 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 OR2T34Q8NGX1 318 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 C18orf25Q96B23 403 aaPredicted RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 BIRC8Q96P09 236 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 GMLQ99445 158 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 DEFB129Q9H1M3 183 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 HACL1Q9UJ83 578 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 BPTFQ12830 3046 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 SHROOM3Q8TF72 1996 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 AP3B1O00203 1094 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 ANGPT2O15123 496 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 MDM4O15151 490 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 CABYRO75952 493 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 IL7RP16871 459 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 ERCC2P18074 760 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 NR2C2P49116 596 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 PLA2G4EQ3MJ16 856 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 RABL3Q5HYI8 236 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 ANKRD26P1Q6NSI1 321 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 CLEC4FQ8N1N0 589 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 HDAC10Q969S8 669 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 SNX27Q96L92 541 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 ZBED2Q9BTP6 218 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 MIR1-1HGQ9H1L0 117 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 GPRC5DQ9NZD1 345 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 PKD2L2Q9NZM6 624 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 FBXO9Q9UK97 447 aaPredicted RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 FNDC3AQ9Y2H6 1198 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 LRRC14BA6NHZ5 514 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 NFKBIEO00221 500 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 RSL1D1O76021 490 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 MAGEA6P43360 314 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 ADAM17P78536 824 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 SAMD4BQ5PRF9 694 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 RBM20Q5T481 1227 aaKnown RBP13.24□□□□□ -0.29
MSH6-214ENST00000616033 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 SPPL2BQ8TCT7 592 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 IRGQQ8WZA9 623 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 EDEM1Q92611 657 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 TMEM74Q96NL1 305 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 NAT9Q9BTE0 207 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 OSBPL2Q9H1P3 480 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 CSADQ9Y600 493 aa13.24□□□□□ -0.29
MSH6-214ENST00000616033 COL11A2P13942 1736 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 TRPC5OSA6NMA1 111 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ESRRBO95718 433 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 PTPN3P26045 913 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 GABRB3P28472 473 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 VASH1Q7L8A9 365 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 CUZD1Q86UP6 607 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZNF354CQ86Y25 554 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 HMGCLL1Q8TB92 370 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ANKRD60Q9BZ19 345 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 EHD1Q9H4M9 534 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 GOLGA2P5Q9HBQ8 144 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZNF229Q9UJW7 825 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZNF214Q9UL59 606 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 GPSM3Q9Y4H4 160 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 N6AMT1Q9Y5N5 214 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 FARP2O94887 1054 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 TXNP10599 105 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms