RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 RIOK3O14730 519 aaKnown RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CBFA2T3O75081 653 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 MTA2O94776 668 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 THEGLP0DJG4 465 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 C6P13671 934 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CD86P42081 329 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 HCAR3P49019 387 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PEX5P50542 639 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CLCN6P51797 869 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 IL10RBQ08334 325 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 MTM1Q13496 603 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PDE1CQ14123 709 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 INPP5AQ14642 412 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 INO80DQ53TQ3 878 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 WDR45BQ5MNZ6 344 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 SPOCD1Q6ZMY3 1216 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PTAR1Q7Z6K3 402 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PRPF39Q86UA1 669 aaKnown RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 NETO1Q8TDF5 533 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CENPTQ96BT3 561 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PSKH2Q96QS6 385 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CEP44Q9C0F1 390 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 MYLKQ15746 1914 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PTPRBP23467 1997 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PMS2P1A4D2B8 440 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TMEM202A6NGA9 273 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TLR4O00206 839 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 IGSF6O95976 241 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PCCBP05166 539 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CXCR5P32302 372 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 MMP13P45452 471 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 POLD2P49005 469 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TERF1P54274 439 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 AIF1P55008 147 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 GDF10P55107 478 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 RACK1P63244 317 aaKnown RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PUM1Q14671 1186 aaKnown RBP eCLIP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PAFAH1B3Q15102 231 aaKnown RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 IRF4Q15306 451 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ARMC12Q5T9G4 340 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 SLC9A4Q6AI14 798 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 RD3Q7Z3Z2 195 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 NT5DC3Q86UY8 548 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 EID2Q8N6I1 236 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ZNF557Q8N988 423 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 GLIS1Q8NBF1 620 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 NCAPGQ9BPX3 1015 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 APOL2Q9BQE5 337 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 HDAC8Q9BY41 377 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 DYRK4Q9NR20 520 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 KLK13Q9UKR3 277 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 SHOC2Q9UQ13 582 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ADGRG1Q9Y653 693 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 KMT2BQ9UMN6 2715 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 hCG_1818297A0A087WSY0 165 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 GSRP00390 522 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CCNB1P14635 433 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 VASPP50552 380 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 NXPH1P58417 271 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 WASHC5Q12768 1159 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 FZD2Q14332 565 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 HADHQ16836 314 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 FAXCQ5TGI0 409 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 FAM46CQ5VWP2 391 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 Q6ZVL8 140 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 PIP4P1Q86T03 277 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 PIH1D2Q8WWB5 315 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ISG20Q96AZ6 181 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 PDXPQ96GD0 296 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 OLFM3Q96PB7 478 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 MGME1Q9BQP7 344 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ZNF670Q9BS34 389 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CACNA1GO43497 2377 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CCL22O00626 93 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ENC1O14682 589 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 DDX3YO15523 660 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 LRP3O75074 770 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 USP12O75317 370 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CLDN7O95471 211 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ZNF235Q14590 738 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ACAP1Q15027 740 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CNGA3Q16281 694 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 TMCO4Q5TGY1 634 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 MARC1Q5VT66 337 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 LRRC8AQ8IWT6 810 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 TP53I13Q8NBR0 393 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ECHDC3Q96DC8 303 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CNTNAP3BQ96NU0 1288 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CNTNAP3Q9BZ76 1288 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 GRPEL1Q9HAV7 217 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 PCOLCE2Q9UKZ9 415 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 WASF3Q9UPY6 502 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 C1QTNF9BB2RNN3 333 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 FANCGO15287 622 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 OPHN1O60890 802 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 RECQL5O94762 991 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ATP1A1P05023 1023 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 C1QTNF9P0C862 333 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms