RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 B4GALT4O60513 344 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 MFN2O95140 757 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SNAP29O95721 258 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 AHSGP02765 367 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 NKX2-5P52952 324 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 SQLEQ14534 574 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 RABL3Q5HYI8 236 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SYPL2Q5VXT5 272 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SPESP1Q6UW49 350 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 TIFABQ6ZNK6 161 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 MILR1Q7Z6M3 343 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 TFAP2DQ7Z6R9 452 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SCN4BQ8IWT1 228 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 PTGR2Q8N8N7 351 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 HERC2P3Q9BVR0 1158 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 RHOJQ9H4E5 214 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 FAM50BQ9Y247 325 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 MTF2Q9Y483 593 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 NOBOXO60393 691 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 DAB1O75553 588 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 NADKO95544 446 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 IL1BP01584 269 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 HMBSP08397 361 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 CPB1P15086 417 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SLC7A1P30825 629 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 CRTC3Q6UUV7 619 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 PIWIL3Q7Z3Z3 882 aaKnown RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 PIWIL4Q7Z3Z4 852 aaKnown RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 RAVER1Q8IY67 606 aaKnown RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 SLC15A4Q8N697 577 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 TMEM74Q96NL1 305 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 ROGDIQ9GZN7 287 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 ITM2CQ9NQX7 267 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 IPO11Q9UI26 975 aaKnown RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 FUOMA2VDF0 154 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 C16orf96A6NNT2 1141 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 PTPN3P26045 913 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 BCAP31P51572 246 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 CHRNB3Q05901 458 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 MADCAM1Q13477 382 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 SLCO6A1Q86UG4 719 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 C6orf62Q9GZU0 229 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 PLK2Q9NYY3 685 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 IFT80Q9P2H3 777 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 IGSF9Q9P2J2 1179 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 ADAM28Q9UKQ2 775 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 CNTN6Q9UQ52 1028 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
CDH5-208ENST00000614547 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 KATNA1O75449 491 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 FARP2O94887 1054 aaPredicted RBP11.83□□□□□ -0.51
CDH5-208ENST00000614547 ECT2LQ008S8 904 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 RBM20Q5T481 1227 aaKnown RBP11.83□□□□□ -0.51
CDH5-208ENST00000614547 GPR158Q5T848 1215 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 METTL7BQ6UX53 244 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 SFRP1Q8N474 314 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 TXNDC5Q8NBS9 432 aaKnown RBP11.83□□□□□ -0.51
CDH5-208ENST00000614547 OR10Q1Q8NGQ4 319 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 SKA2Q8WVK7 121 aaPredicted RBP11.83□□□□□ -0.51
CDH5-208ENST00000614547 ARNTL2Q8WYA1 636 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 OSMRQ99650 979 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 HIPK3Q9H422 1215 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 NT5MQ9NPB1 228 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 ANGPTL3Q9Y5C1 460 aa11.83□□□□□ -0.51
CDH5-208ENST00000614547 TTC24A2A3L6 582 aaPredicted RBP11.83□□□□□ -0.52
CDH5-208ENST00000614547 MDM4O15151 490 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
CDH5-208ENST00000614547 RPS9P46781 194 aaKnown RBP11.83□□□□□ -0.52
CDH5-208ENST00000614547 GJA8P48165 433 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 NIPAL4Q0D2K0 466 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 FAM162AQ96A26 154 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 IL22Q9GZX6 179 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 SMARCAD1Q9H4L7 1026 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 MAFBQ9Y5Q3 323 aaPredicted RBP11.83□□□□□ -0.52
CDH5-208ENST00000614547 HACD1B0YJ81 288 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 SDHDO14521 159 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 FAM189A1O60320 539 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 CNOT3O75175 753 aaKnown RBP11.83□□□□□ -0.52
CDH5-208ENST00000614547 CYP2C8P10632 490 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 MLNP12872 115 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 CD247P20963 164 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 GLDCP23378 1020 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 BMXP51813 675 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 TAF2Q6P1X5 1199 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 ANKRD52Q8NB46 1076 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 TNIP3Q96KP6 325 aa11.83□□□□□ -0.52
CDH5-208ENST00000614547 RERGLQ9H628 205 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms