RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 RBM22Q9NW64 420 aaKnown RBP eCLIP16.61■□□□□ 0.25
CNOT3-208ENST00000613073 MARCH5Q9NX47 278 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 SIRPGQ9P1W8 387 aa16.61■□□□□ 0.25
CNOT3-208ENST00000613073 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 DCXO43602 365 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 PMPCBO75439 489 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 IL1BP01584 269 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 THRAP10827 490 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 HOXD12P35452 270 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 NR1H2P55055 460 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TAF10Q12962 218 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 POU6F1Q14863 301 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF280DQ6N043 979 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 POTEHQ6S545 545 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 AHI1Q8N157 1196 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 FBXW8Q8N3Y1 598 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
CNOT3-208ENST00000613073 PPP1R14BQ96C90 147 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 CAB39LQ9H9S4 337 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 PNPOQ9NVS9 261 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TLR6Q9Y2C9 796 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 CNTN5O94779 1100 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 YWHAQP27348 245 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 HOXC13P31276 330 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 HTRA3P83110 453 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 CDH17Q12864 832 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TUBB3Q13509 450 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 RARS2Q5T160 578 aaKnown RBP16.6■□□□□ 0.25
CNOT3-208ENST00000613073 NAPEPLDQ6IQ20 393 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 FAM126BQ8IXS8 530 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 RTL3Q8N8U3 475 aaKnown RBP16.6■□□□□ 0.25
CNOT3-208ENST00000613073 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TSGA13Q96PP4 275 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 IARS2Q9NSE4 1012 aaKnown RBP16.6■□□□□ 0.25
CNOT3-208ENST00000613073 MKS1Q9NXB0 559 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 EMCNQ9ULC0 261 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 PSMD13Q9UNM6 376 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 MATN3O15232 486 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 HLA-DQB2P05538 268 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 BPGMP07738 259 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 HALP42357 657 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 ATN1P54259 1190 aaPredicted RBP16.6■□□□□ 0.25
CNOT3-208ENST00000613073 CCL23P55773 120 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 DUSP4Q13115 394 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 C10orf120Q5SQS8 335 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TEDDM1Q5T9Z0 273 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 FUT10Q6P4F1 479 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 Q6ZNX1 250 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 KCNMB4Q86W47 210 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF354CQ86Y25 554 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 SLC15A3Q8IY34 581 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 CPNE1Q99829 537 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 IL22Q9GZX6 179 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF696Q9H7X3 374 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 GLOD4Q9HC38 313 aa16.6■□□□□ 0.25
CNOT3-208ENST00000613073 TBKBP1A7MCY6 615 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 AIM2O14862 343 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 RPL10P27635 214 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 GJA8P48165 433 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 NPY2RP49146 381 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PGGT1BP53609 377 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 APOFQ13790 326 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 MRPL58Q14197 206 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 DLG2Q15700 870 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 CCDC92Q53HC0 331 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 ALFQ53S48 1182 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PDPK2PQ6A1A2 396 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PRSS55Q6UWB4 352 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 SLC39A13Q96H72 371 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 FICDQ9BVA6 458 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 IPO11Q9UI26 975 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 SH3PXD2BA1X283 911 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 MTMR11A4FU01 709 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 CFLARO15519 480 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 CDH15P55291 814 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 BFSP2Q13515 415 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PCSK7Q16549 785 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 FASTKD1Q53R41 847 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 MS4A13Q5J8X5 152 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 TMEM53Q6P2H8 277 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 MAVSQ7Z434 540 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 CIR1Q86X95 450 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 LZTR1Q8N653 840 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 ACVR1CQ8NER5 493 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PIWIL2Q8TC59 973 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 ATP2A3Q93084 1043 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 PPP1R36Q96LQ0 422 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 IL12RB2Q99665 862 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 TBL1YQ9BQ87 522 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 NOL6Q9H6R4 1146 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 SNX15Q9NRS6 342 aa16.59■□□□□ 0.25
CNOT3-208ENST00000613073 AAR2Q9Y312 384 aaKnown RBP16.59■□□□□ 0.25
CNOT3-208ENST00000613073 KLHL41O60662 606 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 SNNO75324 88 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms