RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SPATS2Q86XZ4 545 aaKnown RBP12.42□□□□□ -0.42
CBWD3-208ENST00000612050 CCDC50Q8IVM0 306 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 EID2Q8N6I1 236 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 HDAC11Q96DB2 347 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 RNF157Q96PX1 679 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 FERMT1Q9BQL6 677 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 DUSP23Q9BVJ7 150 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 IMPACTQ9P2X3 320 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 DNPEPQ9ULA0 475 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 PHTF1Q9UMS5 762 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 HEY1Q9Y5J3 304 aa12.42□□□□□ -0.42
CBWD3-208ENST00000612050 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 ENC1O14682 589 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 BUB1BO60566 1050 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 CBFA2T3O75081 653 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 NDUFA10O95299 355 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 LCA5LO95447 670 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 C6P13671 934 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 CCNB1P14635 433 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 COMTP21964 271 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 KELP23276 732 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 MMP12P39900 470 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 LIG3P49916 1009 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 PEX5P50542 639 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 ARSEP51690 589 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 PDK1Q15118 436 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 DAAM2Q86T65 1068 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 GLMNQ92990 594 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 FATE1Q969F0 183 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 FAF2Q96CS3 445 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 ECHDC3Q96DC8 303 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 RBM41Q96IZ5 413 aaKnown RBP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 TSGA13Q96PP4 275 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 GGT7Q9UJ14 662 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 DOLKQ9UPQ8 538 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 COL5A1P20908 1838 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-208ENST00000612050 DCHS1Q96JQ0 3298 aa12.41□□□□□ -0.42
CBWD3-208ENST00000612050 DOCK9Q9BZ29 2069 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 POM121BA6NF01 834 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 CACNB4O00305 520 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 SDC3O75056 442 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 PTMAP06454 111 aaKnown RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 C1SP09871 688 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 IL4RP24394 825 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 HNF1BP35680 557 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 RGRP47804 291 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 DUSP3P51452 185 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 MAXP61244 160 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 AP1B1Q10567 949 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 BNIP3Q12983 259 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 GSE1Q14687 1217 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 ACOX1Q15067 660 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 FAXCQ5TGI0 409 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 CCDC181Q5TID7 509 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 DPPA4Q7L190 304 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 TP53INP2Q8IXH6 220 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 BAHD1Q8TBE0 780 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 SCG3Q8WXD2 468 aaKnown RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 RAPGEF5Q92565 580 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 BMFQ96LC9 184 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 BAG1Q99933 345 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-208ENST00000612050 SEMA3CQ99985 751 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 SPASTQ9UBP0 616 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 PCDHGC4Q9Y5F7 938 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 PCDHGA1Q9Y5H4 931 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 LAMA1P25391 3075 aa12.4□□□□□ -0.42
CBWD3-208ENST00000612050 PCNX2A6NKB5 2137 aa12.4□□□□□ -0.43
CBWD3-208ENST00000612050 CACNA1AO00555 2505 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 HYAL3O43820 417 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-208ENST00000612050 NRDCO43847 1150 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 RFPL3O75679 317 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 PIAS2O75928 621 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 ZRANB2O95218 330 aaKnown RBP eCLIP12.39□□□□□ -0.43
CBWD3-208ENST00000612050 CSF2P04141 144 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 CTSEP14091 401 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 JUNDP17535 347 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 DGKAP23743 735 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 CDC25BP30305 580 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 VIPR1P32241 457 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 NR2C2P49116 596 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 PFN3P60673 137 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 PPARDQ03181 441 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 ILKQ13418 452 aa12.39□□□□□ -0.43
CBWD3-208ENST00000612050 MTM1Q13496 603 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms