RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 PPP1R2P1Q96PQ5 205 aa11.64□□□□□ -0.55
CTCFL-221ENST00000608903 CPEB1Q9BZB8 566 aaKnown RBP11.64□□□□□ -0.55
CTCFL-221ENST00000608903 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
CTCFL-221ENST00000608903 ZDHHC6Q9H6R6 413 aa11.64□□□□□ -0.55
CTCFL-221ENST00000608903 C8orf33Q9H7E9 229 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-221ENST00000608903 POLR3BQ9NW08 1133 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-221ENST00000608903 PCDHB9Q9Y5E1 797 aa11.64□□□□□ -0.55
CTCFL-221ENST00000608903 MAD1L1Q9Y6D9 718 aa11.64□□□□□ -0.55
CTCFL-221ENST00000608903 CPP00450 1065 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 NUDT17P0C025 328 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 MYZAPP0CAP1 466 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 HNRNPLP14866 589 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 NMBRP28336 390 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 TIE1P35590 1138 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 TNFRSF4P43489 277 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 PTPRCAPQ14761 206 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 ARSIQ5FYB1 569 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 KDM1BQ8NB78 822 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 ECHDC3Q96DC8 303 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 IFT43Q96FT9 208 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 CD320Q9NPF0 282 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 PRSS16Q9NQE7 514 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 SLC2A6Q9UGQ3 507 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 STON1Q9Y6Q2 735 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 LEFTY1O75610 366 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 UGT2B4P06133 528 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 CTPS1P17812 591 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 NNMTP40261 264 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 ST8SIA6P61647 398 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 SEMG2Q02383 582 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 PPARDQ03181 441 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 BCL2L1Q07817 233 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 C2orf27AQ580R0 203 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 STEAP4Q687X5 459 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 TRMT10BQ6PF06 316 aaKnown RBP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 KDM7AQ6ZMT4 941 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 MDGA1Q8NFP4 955 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 MFSD3Q96ES6 412 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 HEPHQ9BQS7 1158 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 SUV39H2Q9H5I1 410 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 SMYD2Q9NRG4 433 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 IL1RAPL1Q9NZN1 696 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 BFARQ9NZS9 450 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 THEGQ9P2T0 379 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 ZC3H7BQ9UGR2 993 aaKnown RBP11.63□□□□□ -0.55
CTCFL-221ENST00000608903 DUSP12Q9UNI6 340 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 FAM50BQ9Y247 325 aa11.63□□□□□ -0.55
CTCFL-221ENST00000608903 CKAP5Q14008 2032 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ZCWPW2A0A1B0GU75 182 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 LDB2O43679 373 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 BUD23O43709 281 aaKnown RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ADAM23O75077 832 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ALPIP09923 528 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 NR1D1P20393 614 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 EFTUD2Q15029 972 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CDKN3Q16667 212 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 POM121L1PQ3SYA9 428 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 KIAA1211LQ6NV74 962 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PKN3Q6P5Z2 889 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 SERPINA13PQ6UXR4 307 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 C3orf62Q6ZUJ4 267 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ZNF513Q8N8E2 541 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 EID2BQ96D98 161 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 LRRC39Q96DD0 335 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 KLHL32Q96NJ5 620 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TUBGCP5Q96RT8 1024 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 KIFC1Q9BW19 673 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CAPS2Q9BXY5 557 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 RABGEF1Q9UJ41 708 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 SOX13Q9UN79 622 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TCAF1Q9Y4C2 921 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 EDDM13A0A1B0GTR0 161 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 KRBA1A5PL33 1030 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CXorf49A8MYA2 514 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PLK4O00444 970 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CCL22O00626 93 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 FGF1P05230 155 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 GCAP28676 217 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ABL2P42684 1182 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TTC31Q49AM3 519 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ANKRD20A4Q4UJ75 823 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 LRRC73Q5JTD7 316 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PCID2Q5JVF3 399 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ARMC12Q5T9G4 340 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ESRP1Q6NXG1 681 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms