RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SCG3Q8WXD2 468 aaKnown RBP13.27□□□□□ -0.29
RPS28-204ENST00000602140 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.29
RPS28-204ENST00000602140 APOOQ9BUR5 198 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 DPH1Q9BZG8 443 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 DONSONQ9NYP3 566 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 SIRPGQ9P1W8 387 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 OR1A2Q9Y585 309 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 PCDHGA8Q9Y5G5 932 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 ATMQ13315 3056 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 PMS2P1A4D2B8 440 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 EEF2KO00418 725 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 RASGRP1O95267 797 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 PRKCGP05129 697 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 ALPIP09923 528 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 CCDC172P0C7W6 258 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 HTR1BP28222 390 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 HTR7P34969 479 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 RGRP47804 291 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 PAPOLAP51003 745 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 SRP54P61011 504 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 NFATC4Q14934 902 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 STX1AQ16623 288 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 CA9Q16790 459 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 ERAP2Q6P179 960 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 BRAT1Q6PJG6 821 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 NYAP1Q6ZVC0 841 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 IRF2BP2Q7Z5L9 587 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 ZSWIM9Q86XI8 627 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 KYQ8NBH2 561 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 WDR36Q8NI36 951 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 PCDH19Q8TAB3 1148 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 TUBGCP5Q96RT8 1024 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 EDEM3Q9BZQ6 932 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 SLC39A8Q9C0K1 460 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
RPS28-204ENST00000602140 KLQ9UEF7 1012 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 AP4E1Q9UPM8 1137 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 ATP8A1Q9Y2Q0 1164 aa13.26□□□□□ -0.29
RPS28-204ENST00000602140 ARHGAP42A6NI28 874 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 ERVH48-1M5A8F1 160 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 DAPK3O43293 454 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PALMO75781 387 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 TNFSF15O95150 251 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PCCBP05166 539 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 TNFAIP3P21580 790 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PSMA2P25787 234 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 SERPINA4P29622 427 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 MMP12P39900 470 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PDX1P52945 283 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 MAMLD1Q13495 774 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 NCAPHQ15003 741 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 AGERQ15109 404 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 TAF1BQ53T94 588 aaPredicted RBP13.25□□□□□ -0.29
RPS28-204ENST00000602140 ERMARDQ5T6L9 678 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 LVRNQ6Q4G3 990 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 SRLQ86TD4 932 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 GKN2Q86XP6 184 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 ARL14Q8N4G2 192 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 ARL10Q8N8L6 244 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PLA2G15Q8NCC3 412 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 TSEN2Q8NCE0 465 aaKnown RBP13.25□□□□□ -0.29
RPS28-204ENST00000602140 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPS28-204ENST00000602140 HSD3B7Q9H2F3 369 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 ATP13A3Q9H7F0 1226 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PARVAQ9NVD7 372 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 PCSK1NQ9UHG2 260 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 RABGEF1Q9UJ41 708 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 GPR34Q9UPC5 381 aa13.25□□□□□ -0.29
RPS28-204ENST00000602140 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 NTN3O00634 580 aaPredicted RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 TNFP01375 233 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 ATP1A3P13637 1013 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 CSNK1DP48730 415 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 SKOR1P84550 965 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 RHDQ02161 417 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 CFHR1Q03591 330 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 VAC14Q08AM6 782 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 MTM1Q13496 603 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 KCTD16Q68DU8 428 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 CCDC74AQ96AQ1 378 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 WDR92Q96MX6 357 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 PEBP4Q96S96 227 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
RPS28-204ENST00000602140 CINPQ9BW66 212 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms