RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 ITM2BQ9Y287 266 aa19.47■□□□□ 0.71
UPF1-209ENST00000600310 PPIL1Q9Y3C6 166 aa19.47■□□□□ 0.71
UPF1-209ENST00000600310 PCDHGA5Q9Y5G8 931 aa19.47■□□□□ 0.71
UPF1-209ENST00000600310 MEI4A8MW99 385 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 NEMP1O14524 444 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 LATO43561 262 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 RNGTTO60942 597 aaKnown RBP19.46■□□□□ 0.71
UPF1-209ENST00000600310 FSBPO95073 299 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 EPN2O95208 641 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 PRKCGP05129 697 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 PPP2CBP62714 309 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 PPP2CAP67775 309 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 P3H1Q32P28 736 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 TMEM52BQ4KMG9 183 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 WDR45BQ5MNZ6 344 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 KIAA1161Q6NSJ0 714 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 KDELC1Q6UW63 502 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 HORMAD1Q86X24 394 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 CREG2Q8IUH2 290 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 OXNAD1Q96HP4 312 aaPredicted RBP19.46■□□□□ 0.71
UPF1-209ENST00000600310 AP1M1Q9BXS5 423 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
UPF1-209ENST00000600310 ZFR2Q9UPR6 939 aaKnown RBP19.46■□□□□ 0.71
UPF1-209ENST00000600310 A0A1W2PQU0 124 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 PMPCBO75439 489 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 ANXA9O76027 345 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 RETP07949 1114 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 ITPKAP23677 461 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 NFKBIAP25963 317 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 RPS21P63220 83 aaKnown RBP19.45■□□□□ 0.7
UPF1-209ENST00000600310 MPP3Q13368 585 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 PARP6Q2NL67 630 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 ZNF284Q2VY69 593 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 TMEM259Q4ZIN3 620 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 ARHGEF18Q6ZSZ5 1173 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 CYP2U1Q7Z449 544 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 NDUFAF2Q8N183 169 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 C12orf50Q8NA57 414 aaPredicted RBP19.45■□□□□ 0.7
UPF1-209ENST00000600310 MAGOHBQ96A72 148 aaKnown RBP19.45■□□□□ 0.7
UPF1-209ENST00000600310 SCRN2Q96FV2 425 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 C16orf45Q96MC5 204 aaPredicted RBP19.45■□□□□ 0.7
UPF1-209ENST00000600310 PPP1R2P1Q96PQ5 205 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 TRIB3Q96RU7 358 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 ORAI3Q9BRQ5 295 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 UBP1Q9NZI7 540 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 RNF14Q9UBS8 474 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 GMEB2Q9UKD1 530 aa19.45■□□□□ 0.7
UPF1-209ENST00000600310 GOLGA6L10A0A0M3HER8 536 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 A0A1W2PPC4 97 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 F5H423 210 aaPredicted RBP19.44■□□□□ 0.7
UPF1-209ENST00000600310 EPOP01588 193 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 CD27P26842 260 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 MAOBP27338 520 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 PSMB4P28070 264 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 NUDT1P36639 197 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 MMP12P39900 470 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 DPP6P42658 865 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 KCNJ1P48048 391 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 EPHB1P54762 984 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 GEMP55040 296 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 WNT3AP56704 352 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 FAM193AP78312 1265 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 CREB5Q02930 508 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 CDK18Q07002 472 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 RALGDSQ12967 914 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 PRPSAP1Q14558 356 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 PCSK7Q16549 785 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 PEAR1Q5VY43 1037 aaPredicted RBP19.44■□□□□ 0.7
UPF1-209ENST00000600310 SEL1L3Q68CR1 1132 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 USP45Q70EL2 814 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 DPPA4Q7L190 304 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 SYT12Q8IV01 421 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 KLHDC8BQ8IXV7 354 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 RGL4Q8IZJ4 473 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 LPCAT1Q8NF37 534 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 SNX19Q92543 992 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 MCCC1Q96RQ3 725 aaPredicted RBP19.44■□□□□ 0.7
UPF1-209ENST00000600310 GORASP1Q9BQQ3 440 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 ADGRE3Q9BY15 652 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 EBF2Q9HAK2 575 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 B4GALT6Q9UBX8 382 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 EIF2B4Q9UI10 523 aaKnown RBP19.44■□□□□ 0.7
UPF1-209ENST00000600310 PILRBQ9UKJ0 227 aa19.44■□□□□ 0.7
UPF1-209ENST00000600310 AAR2Q9Y312 384 aaKnown RBP19.44■□□□□ 0.7
UPF1-209ENST00000600310 THADAQ6YHU6 1953 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 A0A0J9YYE9 177 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 LOC285095A0A1B0GVY8 99 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 METTL18O95568 372 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 NDST3O95803 873 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 IFNB1P01574 187 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 TRBC1P01850 177 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 TUBB4AP04350 444 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 CYP2A6P11509 494 aaPredicted RBP19.43■□□□□ 0.7
UPF1-209ENST00000600310 MAT2AP31153 395 aaKnown RBP19.43■□□□□ 0.7
UPF1-209ENST00000600310 HOXD12P35452 270 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 GRIA4P48058 902 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 QPCTQ16769 361 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 CCDC89Q8N998 374 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 ATL2Q8NHH9 583 aa19.43■□□□□ 0.7
UPF1-209ENST00000600310 C1orf216Q8TAB5 229 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms