RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 ULK2Q8IYT8 1036 aa21.75■■□□□ 1.07
GRAMD1A-212ENST00000600231 RNF168Q8IYW5 571 aaPredicted RBP21.75■■□□□ 1.07
GRAMD1A-212ENST00000600231 PRICKLE1Q96MT3 831 aaPredicted RBP21.75■■□□□ 1.07
GRAMD1A-212ENST00000600231 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.75■■□□□ 1.073e-6■■■□□ 16.9
GRAMD1A-212ENST00000600231 LOC100653049A0A140TA62 436 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 KRT34O76011 436 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 KRT36O76013 467 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 SERPINF2P08697 491 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 HLA-DPA1P20036 260 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 CCNG1P51959 295 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 COPAP53621 1224 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 CDH4P55283 916 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 SEL1L3Q68CR1 1132 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 PDZD8Q8NEN9 1154 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 ZNF599Q96NL3 588 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 OSBPL1AQ9BXW6 950 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 GPAMQ9HCL2 828 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 VWA7Q9Y334 891 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 NEMP1O14524 444 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 GRID2O43424 1007 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 EPOP01588 193 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 FGF1P05230 155 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 SGSHP51688 502 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 FAM83EQ2M2I3 478 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 DNAJC1Q96KC8 554 aaKnown RBP21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 NSMCE3Q96MG7 304 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 NUF2Q9BZD4 464 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 AFF4Q9UHB7 1163 aaKnown RBP21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 SLC7A8Q9UHI5 535 aa21.74■■□□□ 1.07
GRAMD1A-212ENST00000600231 MICAL3Q7RTP6 2002 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 STC2O76061 302 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CCDC166P0CW27 439 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 EPHA3P29320 983 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 METTL21CQ5VZV1 264 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 ALG1LQ6GMV1 187 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 KLHDC10Q6PID8 442 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 GALNT7Q86SF2 657 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 ZNF461Q8TAF7 563 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 SH3RF2Q8TEC5 729 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 ANKRD49Q8WVL7 239 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CEP295NLQ96MC4 621 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 RNF38Q9H0F5 515 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CRYL1Q9Y2S2 319 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CORO1AP31146 461 aaKnown RBP21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 RGRP47804 291 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 PTDSS1P48651 473 aaKnown RBP21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 BTG3Q14201 252 aaPredicted RBP21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 RCN1Q15293 331 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 TECRLQ5HYJ1 363 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 TLDC1Q6P9B6 456 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 OR13C4Q8NGS5 318 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 OVCA2Q8WZ82 227 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CMTM5Q96DZ9 223 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 MGME1Q9BQP7 344 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 POMKQ9H5K3 350 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 CYP4F11Q9HBI6 524 aa21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 MTF2Q9Y483 593 aaPredicted RBP21.73■■□□□ 1.07
GRAMD1A-212ENST00000600231 KCNA5P22460 613 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 KPNA2P52292 529 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 CDKN2DP55273 166 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 ACVR1Q04771 509 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 SLC14A2Q15849 920 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 FSCBQ5H9T9 825 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 AGAP9Q5VTM2 703 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 FAM43BQ6ZT52 329 aaPredicted RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 BRSK1Q8TDC3 778 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 WBP2Q969T9 261 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 EXOC2Q96KP1 924 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 UBXN10Q96LJ8 280 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 PSKH2Q96QS6 385 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 TRPM5Q9NZQ8 1165 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 LAMA2P24043 3122 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 PSMG1O95456 288 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 GOT2P00505 430 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 JUNP05412 331 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 LTA4HP09960 611 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 ATP5F1P24539 256 aaPredicted RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 PEX6Q13608 980 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 LSM12Q3MHD2 195 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 RALGPS1Q5JS13 557 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 TMEM207Q6UWW9 146 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 TRIM67Q6ZTA4 783 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 PDCD6IPQ8WUM4 868 aaKnown RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 TSPAN17Q96FV3 270 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 TRIB3Q96RU7 358 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 NCKIPSDQ9NZQ3 722 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 UBA2Q9UBT2 640 aaPredicted RBP21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 SEPT3Q9UH03 358 aa21.72■■□□□ 1.07
GRAMD1A-212ENST00000600231 A0A088AWK7 358 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 ABLIM3O94929 683 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 IRF1P10914 325 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 ASPHQ12797 758 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 KLF10Q13118 480 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 NAA25Q14CX7 972 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 BBS5Q8N3I7 341 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 SHKBP1Q8TBC3 707 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 CYP4F12Q9HCS2 524 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 CCDC162PA2VCL2 907 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 C2orf78A6NCI8 922 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms