RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 DRG2P55039 364 aaKnown RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 TUBB4BP68371 445 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 ECT2LQ008S8 904 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 KDSRQ06136 332 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 GPS1Q13098 491 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SLC14A1Q13336 389 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 RFTN1Q14699 578 aaPredicted RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 LBRQ14739 615 aaKnown RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 PPP1R7Q15435 360 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 PTPRNQ16849 979 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 P3H1Q32P28 736 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 INO80DQ53TQ3 878 aaPredicted RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 LPCAT2Q7L5N7 544 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SYT13Q7L8C5 426 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 PID1Q7Z2X4 250 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 AHI1Q8N157 1196 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 CCDC89Q8N998 374 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 OR2I1PQ8NGU4 316 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 WFIKKN2Q8TEU8 576 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 MYO19Q96H55 970 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 RPL10LQ96L21 214 aaKnown RBP9.56□□□□□ -0.88
TRIM28-208ENST00000597172 NSMCE3Q96MG7 304 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 VAT1Q99536 393 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 TPSD1Q9BZJ3 242 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SEMA4CQ9C0C4 833 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 ETNK1Q9HBU6 452 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 PCDH9Q9HC56 1237 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 NT5MQ9NPB1 228 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 GDF3Q9NR23 364 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 PAK5Q9P286 719 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 TRHDEQ9UKU6 1024 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 ERVW-1Q9UQF0 538 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 SNX24Q9Y343 169 aa9.56□□□□□ -0.88
TRIM28-208ENST00000597172 RELNP78509 3460 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 ESYT3A0FGR9 886 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TBC1D3BA6NDS4 549 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 K7EQS6 105 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 CTIFO43310 598 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TIMM44O43615 452 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 GJB3O75712 270 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TMCC1O94876 653 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 KAT7O95251 611 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 EGFP01133 1207 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 DLDP09622 509 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 SRCP12931 536 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 NFKB1P19838 968 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 ADCY8P40145 1251 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 IL12RB1P42701 662 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 PTGER3P43115 390 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 RPL21P46778 160 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 VPS41P49754 854 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 SERPINH1P50454 418 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 VASPP50552 380 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 RIPPLY3P57055 190 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 MAXP61244 160 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 GUCY2DQ02846 1103 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 SULT2A1Q06520 285 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 NIPAL4Q0D2K0 466 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 DUOXA1Q1HG43 343 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 EMC10Q5UCC4 262 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 RETSATQ6NUM9 610 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 GLRX5Q86SX6 157 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 PRPF39Q86UA1 669 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 NAXDQ8IW45 347 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TAB3Q8N5C8 712 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 SH2D3CQ8N5H7 860 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TERB1Q8NA31 727 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TSEN2Q8NCE0 465 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TSTD1Q8NFU3 115 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 CEP76Q8TAP6 659 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 ARRDC2Q8TBH0 407 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 FRS2Q8WU20 508 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 CYB5D2Q8WUJ1 264 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 NSMCE1Q8WV22 266 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 CASKIN2Q8WXE0 1202 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 UBXN4Q92575 508 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 VOPP1Q96AW1 172 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 PSKH2Q96QS6 385 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 TRIM31Q9BZY9 425 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 DPH5Q9H2P9 285 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 GLOD4Q9HC38 313 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 EPB41L5Q9HCM4 733 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 DNAAF2Q9NVR5 837 aaKnown RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 GRHL1Q9NZI5 618 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 KLHL8Q9P2G9 620 aaPredicted RBP9.55□□□□□ -0.88
TRIM28-208ENST00000597172 LHX3Q9UBR4 397 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
TRIM28-208ENST00000597172 HS3ST2Q9Y278 367 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms