RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZNF805Q5CZA5 627 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 NCEH1Q6PIU2 408 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 ERN2Q76MJ5 926 aaKnown RBP15.12■□□□□ 0.01
TRIM28-207ENST00000597136 LPCAT2Q7L5N7 544 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 ZSWIM9Q86XI8 627 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 MGME1Q9BQP7 344 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 TRIM31Q9BZY9 425 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 RAB17Q9H0T7 212 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 SEMA4AQ9H3S1 761 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 SUV39H2Q9H5I1 410 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRIM28-207ENST00000597136 FZD4Q9ULV1 537 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 PCDHGC4Q9Y5F7 938 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 SLCO1B1Q9Y6L6 691 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 V9GYY5 206 aaPredicted RBP15.12■□□□□ 0.01
TRIM28-207ENST00000597136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 RHOBTB1O94844 696 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 METTL18O95568 372 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TIMP2P16035 220 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ITPKAP23677 461 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ITGB7P26010 798 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ADPRHP54922 357 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 DSC2Q02487 901 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 GUCY2DQ02846 1103 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ITKQ08881 620 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ELF2Q15723 593 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 CCDC6Q16204 474 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ERCC6LQ2NKX8 1250 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 PARP6Q2NL67 630 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ITPRIPL1Q6GPH6 555 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TAB3Q8N5C8 712 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 LRIG1Q96JA1 1093 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 NUDCD1Q96RS6 583 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SEMA3CQ99985 751 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 HDAC8Q9BY41 377 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 GBA3Q9H227 469 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SGK2Q9HBY8 427 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 GLOD4Q9HC38 313 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SCUBE2Q9NQ36 999 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TMEM74BQ9NUR3 256 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 RSPH14Q9UHP6 348 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TTLL3Q9Y4R7 772 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3DA0A087WVF3 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3IA0A087WXS9 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3KA0A087X1G2 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3FA6NER0 549 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 METTL12A8MUP2 240 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3LB9A6J9 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 PLRG1O43660 514 aaKnown RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3HP0C7X1 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ADRB3P13945 408 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 NFKB1P19838 968 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 PSMB4P28070 264 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ABL2P42684 1182 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 DRG2P55039 364 aaKnown RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SEMG2Q02383 582 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3GQ6DHY5 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ALG1LQ6GMV1 187 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3CQ6IPX1 549 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 FBXL19Q6PCT2 694 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 TBC1D3Q8IZP1 549 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ARRDC2Q8TBH0 407 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 BIRC7Q96CA5 298 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 LRRC45Q96CN5 670 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 HSPA12BQ96MM6 686 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ARRDC1-AS1Q9H2J1 176 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SMOC1Q9H4F8 434 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ANKZF1Q9H8Y5 726 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 EBF2Q9HAK2 575 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 ETNK1Q9HBU6 452 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 EPB41L5Q9HCM4 733 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 DYRK4Q9NR20 520 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 RAB6BQ9NRW1 208 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 HAUS2Q9NVX0 235 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 GGT7Q9UJ14 662 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SNX24Q9Y343 169 aa15.11■□□□□ 0.01
TRIM28-207ENST00000597136 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 PCDH15Q96QU1 1955 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 ESYT3A0FGR9 886 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 C10orf142B7Z368 130 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 F5H423 210 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-207ENST00000597136 TRAFD1O14545 582 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-207ENST00000597136 SPINT1O43278 529 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 FSBPO95073 299 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 PRKCGP05129 697 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 IGHV4-34P06331 123 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 MMP2P08253 660 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 FDFT1P37268 417 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
TRIM28-207ENST00000597136 PPP2CBP62714 309 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 PPP2CAP67775 309 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 CREB5Q02930 508 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 BCL2L1Q07817 233 aa15.1■□□□□ 0.01
TRIM28-207ENST00000597136 SFSWAPQ12872 951 aaKnown RBP15.1■□□□□ 0.01
TRIM28-207ENST00000597136 TRAF2Q12933 501 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms