RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 NPC1O15118 1278 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 PAPSS2O95340 614 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 POLBP06746 335 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 CTSLP07711 333 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 SRFP11831 508 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 BMP1P13497 986 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 PSMA3P25788 255 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 PHBP35232 272 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 IL12RB1P42701 662 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 STAT4Q14765 748 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 POU6F1Q14863 301 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 E2F5Q15329 346 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 TMEM196Q5HYL7 178 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 C9orf64Q5T6V5 341 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 EMC10Q5UCC4 262 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 FSTL4Q6MZW2 842 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF449Q6P9G9 518 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 CAPN12Q6ZSI9 719 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 PPHLN1Q8NEY8 458 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 FBF1Q8TES7 1133 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 LRIG1Q96JA1 1093 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 SH3GL2Q99962 352 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 ZDHHC6Q9H6R6 413 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 CHRAC1Q9NRG0 131 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 TREX1Q9NSU2 369 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 RIMKLBQ9ULI2 386 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 SPO11Q9Y5K1 396 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 RPS6KL1Q9Y6S9 549 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 XIRP2A4UGR9 3374 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 LDB2O43679 373 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 BNIP3LO60238 219 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 HLA-EP13747 358 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 NMBRP28336 390 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 GCAP28676 217 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 SLC8A1P32418 973 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 STX2P32856 288 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 GRIA4P48058 902 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ACVR1Q04771 509 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ZP2Q05996 745 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 TSTD2Q5T7W7 516 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 CES3Q6UWW8 571 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 GDPD4Q6W3E5 623 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ADHFE1Q8IWW8 467 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 TTC30BQ8N4P2 665 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF366Q8N895 744 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 BRSK1Q8TDC3 778 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 HCAR2Q8TDS4 363 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 PEX13Q92968 403 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 RMDN1Q96DB5 314 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 MFSD3Q96ES6 412 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF778Q96MU6 729 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 SMIM14Q96QK8 99 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ACOX2Q99424 681 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 DHRS4Q9BTZ2 278 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ROPN1BQ9BZX4 212 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ACBD3Q9H3P7 528 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 ROPN1Q9HAT0 212 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 SMYD2Q9NRG4 433 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 FETUBQ9UGM5 382 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 SUN2Q9UH99 717 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 EYSQ5T1H1 3165 aa14.82□□□□□ -0.04
SHKBP1-211ENST00000595945 A0A0J9YYE9 177 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 A0A1W2PQ67 120 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 SIN3BO75182 1162 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 LEFTY1O75610 366 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 EGFP01133 1207 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 TRBC1P01850 177 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PRKCGP05129 697 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 UGT2B4P06133 528 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PIRTP0C851 137 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 DRD1P21728 446 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 LAMB3Q13751 1172 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 SEPT6Q14141 434 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PON2Q15165 354 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 CDKN3Q16667 212 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 KLHL38Q2WGJ6 581 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 CEP85LQ5SZL2 805 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 SERPINA13PQ6UXR4 307 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 NLRP9Q7RTR0 991 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 TDRPQ86YL5 185 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 STK40Q8N2I9 435 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 TMIEQ8NEW7 156 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 MDGA1Q8NFP4 955 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 KCNV2Q8TDN2 545 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PDCD6IPQ8WUM4 868 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 KLHL32Q96NJ5 620 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 MCCC1Q96RQ3 725 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 LYSMD1Q96S90 227 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 FAM129BQ96TA1 746 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 CYTH2Q99418 400 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 CCDC77Q9BR77 488 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 OSBPL1AQ9BXW6 950 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 MAGEE1Q9HCI5 957 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PRSS16Q9NQE7 514 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms