RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 NCBP2-AS2Q69YL0 99 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 BRAT1Q6PJG6 821 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 PARGQ86W56 976 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 DCP2Q8IU60 420 aaKnown RBP5.9□□□□□ -1.46
SSX4B-201ENST00000595235 RBFAQ8N0V3 343 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 LZTR1Q8N653 840 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 ZNF548Q8NEK5 533 aaPredicted RBP5.9□□□□□ -1.46
SSX4B-201ENST00000595235 OR8K1Q8NGG5 319 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 OR4C6Q8NH72 309 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 FAM174AQ8TBP5 190 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 FAM71BQ8TC56 605 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 HCAR2Q8TDS4 363 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 LRRN4Q8WUT4 740 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 ZNF641Q96N77 438 aaPredicted RBP5.9□□□□□ -1.46
SSX4B-201ENST00000595235 PSKH2Q96QS6 385 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 MGME1Q9BQP7 344 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 TCEAL2Q9H3H9 227 aaPredicted RBP5.9□□□□□ -1.46
SSX4B-201ENST00000595235 SPTLC3Q9NUV7 552 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 CTTNBP2NLQ9P2B4 639 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 UVRAGQ9P2Y5 699 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 ATP8A1Q9Y2Q0 1164 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 PCDHGA10Q9Y5H3 936 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 PCDHGA1Q9Y5H4 931 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 U3KQA8 63 aa5.9□□□□□ -1.46
SSX4B-201ENST00000595235 NCOR2Q9Y618 2525 aa5.9□□□□□ -1.47
SSX4B-201ENST00000595235 SPEGQ15772 3267 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 SRRM3A6NNA2 597 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 A8MX80 341 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 K7ESM1 405 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 HTRA2O43464 458 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 AKR1B10O60218 316 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PCCBP05166 539 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 CELA2BP08218 269 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 H2AFZP0C0S5 128 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NME1P15531 152 aaKnown RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 CKMT2P17540 419 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ACP1P24666 158 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 SERPINA4P29622 427 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 LIG3P49916 1009 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 SUOXP51687 545 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 AP1S1P61966 158 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 BCL2L1Q07817 233 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NSUN2Q08J23 767 aaKnown RBP eCLIP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 GALNT2Q10471 571 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 TRAF2Q12933 501 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 TBX2Q13207 712 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ZNF211Q13398 564 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ZNF235Q14590 738 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 MESDQ14696 234 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PTPRRQ15256 657 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 HADHQ16836 314 aaKnown RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 DEFB133Q30KQ1 61 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ANKRD20A8PQ5CZ79 823 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 FAM182AQ5T1J6 154 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 CFAP58Q5T655 872 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 HES3Q5TGS1 186 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 KCTD16Q68DU8 428 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 LIPIQ6XZB0 460 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 MACC1Q6ZN28 852 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 H2AFVQ71UI9 128 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 DPPA4Q7L190 304 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PHACTR4Q8IZ21 702 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PELI3Q8N2H9 469 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 GALNT15Q8N3T1 639 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ATPAF2Q8N5M1 289 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PQLC3Q8N755 202 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PLA2G15Q8NCC3 412 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PCDH19Q8TAB3 1148 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 MDM1Q8TC05 714 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 CTNNBL1Q8WYA6 563 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 FAF2Q96CS3 445 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 APOLD1Q96LR9 279 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ZNF599Q96NL3 588 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ZNF670Q9BS34 389 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 LRRC61Q9BV99 259 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 C1QTNF7Q9BXJ2 289 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 DEF6Q9H4E7 631 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 ATP13A3Q9H7F0 1226 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NHEJ1Q9H9Q4 299 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NOD2Q9HC29 1040 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 NLGN3Q9NZ94 848 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 RCOR3Q9P2K3 495 aaPredicted RBP5.89□□□□□ -1.47
SSX4B-201ENST00000595235 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 PCDHGC4Q9Y5F7 938 aa5.89□□□□□ -1.47
SSX4B-201ENST00000595235 WDR87Q6ZQQ6 2873 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 A0A0U1RQS6 177 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 NPIPB15A6NHN6 443 aaPredicted RBP5.88□□□□□ -1.47
SSX4B-201ENST00000595235 C3orf70A6NLC5 250 aaPredicted RBP5.88□□□□□ -1.47
SSX4B-201ENST00000595235 H3BM21 787 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 SCAMP1O15126 338 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 CASC3O15234 703 aaKnown RBP5.88□□□□□ -1.47
SSX4B-201ENST00000595235 AQP9O43315 295 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 MAP3K7O43318 606 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 LZTS3O60299 673 aaPredicted RBP5.88□□□□□ -1.47
SSX4B-201ENST00000595235 SOCS5O75159 536 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 GCATO75600 419 aa5.88□□□□□ -1.47
SSX4B-201ENST00000595235 RECQL5O94762 991 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms