RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NXPE2Q96DL1 559 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 IL12RB2Q99665 862 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 XPO4Q9C0E2 1151 aaKnown RBP23.65■■□□□ 1.38
LSM4-204ENST00000594828 APOBEC3BQ9UH17 382 aaKnown RBP23.65■■□□□ 1.38
LSM4-204ENST00000594828 DMXL2Q8TDJ6 3036 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 TPP1O14773 563 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 PEX5P50542 639 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 AP1S1P61966 158 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 SLC25A11Q02978 314 aaKnown RBP23.64■■□□□ 1.37
LSM4-204ENST00000594828 SKOR2Q2VWA4 1001 aaPredicted RBP23.64■■□□□ 1.37
LSM4-204ENST00000594828 PRRT3Q5FWE3 981 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 MACC1Q6ZN28 852 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 PHACTR4Q8IZ21 702 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 RBFAQ8N0V3 343 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 SLC13A1Q9BZW2 595 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 NRSN2Q9GZP1 204 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 TCEAL2Q9H3H9 227 aaPredicted RBP23.64■■□□□ 1.37
LSM4-204ENST00000594828 PCDH18Q9HCL0 1135 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 SALL4Q9UJQ4 1053 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 LHX6Q9UPM6 363 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 GPSM3Q9Y4H4 160 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 AK5Q9Y6K8 562 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 CFAP47Q6ZTR5 3102 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 ZZEF1O43149 2961 aa23.64■■□□□ 1.37
LSM4-204ENST00000594828 LY6G6EA0A0G2JKS1 128 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 CFAP69A5D8W1 941 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 TMEM110-MUSTN1A8MSY1 372 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 MT-CO3P00414 261 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 GP1BAP07359 652 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 SSR1P43307 286 aaKnown RBP23.63■■□□□ 1.37
LSM4-204ENST00000594828 PPARDQ03181 441 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 KRT81Q14533 505 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 ZNF235Q14590 738 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 AGERQ15109 404 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 DEFB133Q30KQ1 61 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 C19orf48Q6RUI8 117 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 DCBLD1Q8N8Z6 715 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 NCKIPSDQ9NZQ3 722 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 PNMA8BQ9ULN7 279 aaPredicted RBP23.63■■□□□ 1.37
LSM4-204ENST00000594828 U3KQA8 63 aa23.63■■□□□ 1.37
LSM4-204ENST00000594828 FREM2Q5SZK8 3169 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 TRAFD1O14545 582 aaPredicted RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 OPA1O60313 960 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 MAFKO60675 156 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 GCATO75600 419 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 HNRNPH3P31942 346 aaKnown RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 SERPINB6P35237 376 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 HSPA9P38646 679 aaKnown RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 ADKP55263 362 aaKnown RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 CDH6P55285 790 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 C1orf61Q13536 156 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 INPP5AQ14642 412 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 HADHQ16836 314 aaKnown RBP23.62■■□□□ 1.37
LSM4-204ENST00000594828 TBATAQ96M53 351 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 NSMCE3Q96MG7 304 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 APOOQ9BUR5 198 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 ABCG4Q9H172 646 aa23.62■■□□□ 1.37
LSM4-204ENST00000594828 KNTC1P50748 2209 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 TTC24A2A3L6 582 aaPredicted RBP23.61■■□□□ 1.37
LSM4-204ENST00000594828 PEX11BO96011 259 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 HTR1BP28222 390 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 BLKP51451 505 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 RALGDSQ12967 914 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 RTP5Q14D33 572 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 CDKN3Q16667 212 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 BBS5Q8N3I7 341 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 ATPAF2Q8N5M1 289 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 ZNF564Q8TBZ8 553 aaPredicted RBP23.61■■□□□ 1.37
LSM4-204ENST00000594828 IFI44Q8TCB0 444 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 NSMCE1Q8WV22 266 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 LRRC61Q9BV99 259 aa23.61■■□□□ 1.37
LSM4-204ENST00000594828 RCOR3Q9P2K3 495 aaPredicted RBP23.61■■□□□ 1.37
LSM4-204ENST00000594828 CPED1A4D0V7 1026 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 LMO7DNF2Z398 122 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 PCCBP05166 539 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 ANXA6P08133 673 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 ELFN1P0C7U0 828 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 IL4RP24394 825 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 ENPP7Q6UWV6 458 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 LIPIQ6XZB0 460 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 HNRNPLLQ8WVV9 542 aaKnown RBP23.6■■□□□ 1.37
LSM4-204ENST00000594828 GLMNQ92990 594 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 NUDCD1Q96RS6 583 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 SCUBE2Q9NQ36 999 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 CTTNBP2NLQ9P2B4 639 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 NENFQ9UMX5 172 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 OR1A2Q9Y585 309 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 PCDHGC4Q9Y5F7 938 aa23.6■■□□□ 1.37
LSM4-204ENST00000594828 MYLKQ15746 1914 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 A0A1W2PQ67 120 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 A8MX80 341 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 YY2O15391 372 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 CBFA2T2O43439 604 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 RECQL5O94762 991 aaPredicted RBP23.59■■□□□ 1.37
LSM4-204ENST00000594828 H2AFZP0C0S5 128 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 TSHRP16473 764 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 CR2P20023 1033 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 HK3P52790 923 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 MMRN1Q13201 1228 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms