RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ETFBP38117 255 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 YPEL5P62699 121 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 PTP4A2Q12974 167 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 CAMK1DQ8IU85 385 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 USP7Q93009 1102 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 NCAPGQ9BPX3 1015 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 LGR4Q9BXB1 951 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 OSBPL1AQ9BXW6 950 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 GANQ9H2C0 597 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 SEMA6CQ9H3T2 930 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 RDH14Q9HBH5 336 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 FGF22Q9HCT0 170 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 NLRC4Q9NPP4 1024 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 RNF215Q9Y6U7 377 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 CFAP46Q8IYW2 2715 aa11.3□□□□□ -0.6
PRKCSH-220ENST00000593104 TTC24A2A3L6 582 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 C9orf172C9J069 976 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 CCP110O43303 1012 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 MMP8P22894 467 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 EPHB2P29323 1055 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 LIG3P49916 1009 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 NRG1Q02297 640 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 RALGDSQ12967 914 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 CLCA4Q14CN2 919 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 C16orf72Q14CZ0 275 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 ELOCQ15369 112 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 UGP2Q16851 508 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 SCYL2Q6P3W7 929 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 GKN2Q86XP6 184 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 FSTL5Q8N475 847 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 RCBTB1Q8NDN9 531 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 SGF29Q96ES7 293 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 TBATAQ96M53 351 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 ARHGAP9Q9BRR9 750 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 TMEM168Q9H0V1 697 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 DKK3Q9UBP4 350 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 DAAM1Q9Y4D1 1078 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 PCDHGA7Q9Y5G6 932 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 HEMK1Q9Y5R4 338 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 AHCTF1Q8WYP5 2266 aa11.29□□□□□ -0.6
PRKCSH-220ENST00000593104 SDK2Q58EX2 2172 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 TNFP01375 233 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 ALPIP09923 528 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 LIPCP11150 499 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 CCL4P13236 92 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 GM2AP17900 193 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 GPD1P21695 349 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 CCKBRP32239 447 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 CDR2Q01850 454 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 SERINC3Q13530 473 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 PTPRRQ15256 657 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 TBR1Q16650 682 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 AMZ1Q400G9 498 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 COLEC12Q5KU26 742 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 PHF19Q5T6S3 580 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 FAM46DQ8NEK8 389 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 PATE1Q8WXA2 126 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 CENPIQ92674 756 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 C1QTNF7Q9BXJ2 289 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 STRADBQ9C0K7 418 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 SUV39H2Q9H5I1 410 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 PDFQ9HBH1 243 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
PRKCSH-220ENST00000593104 A0A0U1RQS6 177 aa11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 TEX33O43247 280 aa11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 B4GAT1O43505 415 aa11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 RECQL5O94762 991 aaPredicted RBP11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 KRT3P12035 628 aa11.27□□□□□ -0.61
PRKCSH-220ENST00000593104 UNGP13051 313 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms