RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 HDAC10Q969S8 669 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 IFT43Q96FT9 208 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 FAR2Q96K12 515 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 TSEN34Q9BSV6 310 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 POLR1EQ9GZS1 481 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 ELAC1Q9H777 363 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 CORO1CQ9ULV4 474 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 PRPF19Q9UMS4 504 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 PCDHB7Q9Y5E2 793 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 AIM2O14862 343 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 SORBS2O94875 1100 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 CCDC166P0CW27 439 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 DSG1Q02413 1049 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 ILF2Q12905 390 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 ZNF235Q14590 738 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 IHHQ14623 411 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 LRRC8DQ7L1W4 858 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 KBTBD2Q8IY47 623 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 KYQ8NBH2 561 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 PYDC1Q8WXC3 89 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 SERPINI1Q99574 410 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 EML4Q9HC35 981 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 STARD7Q9NQZ5 370 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 VWA7Q9Y334 891 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 A0A1W2PQ45 241 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 A0A1W2PQY0 241 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 EIF4E1BA6NMX2 242 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 PRAMEF11O60813 436 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 JUNP05412 331 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 TACR2P21452 398 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 ACVRL1P37023 503 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 ACAP2Q15057 778 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 TCHHL1Q5QJ38 904 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 DHDDSQ86SQ9 333 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC43A3Q8NBI5 491 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 FEM1CQ96JP0 617 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 MARCH5Q9NX47 278 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 CENPFP49454 3210 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 NEMP2A6NFY4 417 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 A8MT66 165 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 TMEM233B4DJY2 109 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 H7C4K7 107 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 IPO13O94829 963 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 ALDH2P05091 517 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 FGF1P05230 155 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 HLA-DPA1P20036 260 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 ARSDP51689 593 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 SATB1Q01826 763 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 TMEM198Q66K66 360 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 NADSYN1Q6IA69 706 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 IZUMO2Q6UXV1 221 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 RNF19BQ6ZMZ0 732 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC22A9Q8IVM8 553 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 MAELQ96JY0 434 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 CRISPLD1Q9H336 500 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 CCSER2Q9H7U1 834 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 CYP4F12Q9HCS2 524 aa16.66■□□□□ 0.26
PRKCSH-217ENST00000592741 F5H5T6 163 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 SDHDO14521 159 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 LDB2O43679 373 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 TLR5O60602 858 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 S1PR4O95977 384 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 SELPP16109 830 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC11A1P49279 550 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 FAM45BPQ6NSW5 357 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 DSELQ8IZU8 1212 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 EFCAB3Q8N7B9 438 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 FAM45AQ8TCE6 357 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 PEX13Q92968 403 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 UBXN10Q96LJ8 280 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 ZNF599Q96NL3 588 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 CASD1Q96PB1 797 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 VCX3BQ9H321 246 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 ZBTB26Q9HCK0 441 aa16.65■□□□□ 0.26
PRKCSH-217ENST00000592741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.65■□□□□ 0.268e-6■■□□□ 11.8
PRKCSH-217ENST00000592741 A6NHS1 94 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 CCL22O00626 93 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 ZDHHC11BP0C7U3 371 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 HOXD10P28358 340 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 SLC26A3P40879 764 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 GATMP50440 423 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 ACVR1Q04771 509 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 SULT2A1Q06520 285 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 CAPRIN2Q6IMN6 1127 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 BNC2Q6ZN30 1099 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 LDB1Q86U70 411 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 LGI2Q8N0V4 545 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 CEP70Q8NHQ1 597 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 GIPC2Q8TF65 315 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 MARK4Q96L34 752 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms