RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 ZNF284Q2VY69 593 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 SLC25A52Q3SY17 297 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 ARSIQ5FYB1 569 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 BRMS1LQ5PSV4 323 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 KLHDC7AQ5VTJ3 777 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 FAM46CQ5VWP2 391 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 TCTN3Q6NUS6 607 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 ESRP1Q6NXG1 681 aaKnown RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 C16orf46Q6P387 395 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 DPY19L3Q6ZPD9 716 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 ABI3BPQ7Z7G0 1075 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 PARGQ86W56 976 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 CCDC13Q8IYE1 715 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 CACNA2D3Q8IZS8 1091 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 RBFAQ8N0V3 343 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 Q8N9G6 341 aaPredicted RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 DCAF4L2Q8NA75 395 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 OR6K2Q8NGY2 324 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 CPA5Q8WXQ8 436 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 NT5C3BQ969T7 300 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 PMEPA1Q969W9 287 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 C18orf8Q96DM3 657 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 BMFQ96LC9 184 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 C5orf34Q96MH7 638 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 EPAS1Q99814 870 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 SPON2Q9BUD6 331 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 NAA15Q9BXJ9 866 aaKnown RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 MAGEB5Q9BZ81 275 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 NUP62CLQ9H1M0 184 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 GANQ9H2C0 597 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 TCEAL2Q9H3H9 227 aaPredicted RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 NDFIP2Q9NV92 336 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 SIRPGQ9P1W8 387 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 ZFR2Q9UPR6 939 aaKnown RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 NEU3Q9UQ49 428 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 ENTPD4Q9Y227 616 aa7.5□□□□□ -1.21
VAT1-209ENST00000592388 FCF1Q9Y324 198 aaKnown RBP7.5□□□□□ -1.21
VAT1-209ENST00000592388 IGLV3-10A0A075B6K4 115 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SPTY2D1-AS1A0A0U1RR47 76 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 POM121BA6NF01 834 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 DRGXA6NNA5 263 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 A6NNZ2 444 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 MKRN2OSH3BPM6 223 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 LEFTY1O75610 366 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ZMPSTE24O75844 475 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 GFPT2O94808 682 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 PDGFAP04085 211 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ANXA6P08133 673 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 UCHL3P15374 230 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 CHRNB2P17787 502 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ITGB7P26010 798 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 OR1E1P30953 314 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ACVRL1P37023 503 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 GABRB2P47870 512 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SERPINH1P50454 418 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 KRT83P78385 493 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ZFP36L1Q07352 338 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 C16orf72Q14CZ0 275 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 PRR30Q53SZ7 412 aaPredicted RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 PRRT3Q5FWE3 981 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 LRRC73Q5JTD7 316 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 TPRG1LQ5T0D9 272 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 PHF19Q5T6S3 580 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SP5Q6BEB4 398 aaPredicted RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 PARS2Q7L3T8 475 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 BNIPLQ7Z465 357 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 HORMAD1Q86X24 394 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 DCP2Q8IU60 420 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 ZDHHC17Q8IUH5 632 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 NETO2Q8NC67 525 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 JOSD2Q8TAC2 188 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SLC30A5Q8TAD4 765 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 GPT2Q8TD30 523 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 TMEM159Q96B96 161 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 PGAP3Q96FM1 320 aaPredicted RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 SLC45A3Q96JT2 553 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 LURAP1Q96LR2 239 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 C11orf70Q9BRQ4 267 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 C2orf49Q9BVC5 232 aaPredicted RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 TM6SF2Q9BZW4 377 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 CDH19Q9H159 772 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 GPN2Q9H9Y4 310 aaPredicted RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 NLRC4Q9NPP4 1024 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 RRN3Q9NYV6 651 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 MAP10Q9P2G4 905 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SPASTQ9UBP0 616 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 IL36AQ9UHA7 158 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 TMEM59LQ9UK28 342 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 NOCTQ9UK39 431 aaKnown RBP7.49□□□□□ -1.21
VAT1-209ENST00000592388 PHTF1Q9UMS5 762 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 ITM2BQ9Y287 266 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 SLC5A6Q9Y289 635 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 RNF215Q9Y6U7 377 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 WASF2Q9Y6W5 498 aa7.49□□□□□ -1.21
VAT1-209ENST00000592388 LMO7DNF2Z398 122 aa7.48□□□□□ -1.21
VAT1-209ENST00000592388 FAM72CH0Y354 149 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms