RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KCND1Q9NSA2 647 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 NDFIP2Q9NV92 336 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 FCF1Q9Y324 198 aaKnown RBP18.18■□□□□ 0.5
VAT1-208ENST00000590924 FADS3Q9Y5Q0 445 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 CAPN6Q9Y6Q1 641 aa18.18■□□□□ 0.5
VAT1-208ENST00000590924 COL27A1Q8IZC6 1860 aaPredicted RBP18.18■□□□□ 0.5
VAT1-208ENST00000590924 C3orf70A6NLC5 250 aaPredicted RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 A6NNZ2 444 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 PIAS2O75928 621 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 ACVRL1P37023 503 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 PEX5P50542 639 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 CLDN2P57739 230 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 COPS2P61201 443 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 RPS21P63220 83 aaKnown RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 TARDBPQ13148 414 aaKnown RBP eCLIP18.17■□□□□ 0.5
VAT1-208ENST00000590924 RTP5Q14D33 572 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 TAZQ16635 292 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 HS1BP3Q53T59 392 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 ANKRD20A8PQ5CZ79 823 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 PARS2Q7L3T8 475 aaKnown RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 DCP2Q8IU60 420 aaKnown RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 UBL4BQ8N7F7 174 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 ARHGEF2Q92974 986 aaKnown RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 RBM41Q96IZ5 413 aaKnown RBP18.17■□□□□ 0.5
VAT1-208ENST00000590924 LRIG1Q96JA1 1093 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 SLC17A9Q9BYT1 436 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 NRSN2Q9GZP1 204 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 ACTL7AQ9Y615 435 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 HS3ST3A1Q9Y663 406 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.17■□□□□ 0.55e-10■■□□□ 13.4
VAT1-208ENST00000590924 LRP4O75096 1905 aa18.17■□□□□ 0.5
VAT1-208ENST00000590924 IGSF10Q6WRI0 2623 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 LRRD1A4D1F6 860 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 RAMP2O60895 175 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 CD48P09326 243 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 DNA2P51530 1060 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 RWDD2BP57060 319 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 FGL2Q14314 439 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 POLD3Q15054 466 aaPredicted RBP18.16■□□□□ 0.5
VAT1-208ENST00000590924 PARP15Q460N3 678 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 KYAT3Q6YP21 454 aaKnown RBP18.16■□□□□ 0.5
VAT1-208ENST00000590924 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 FEM1CQ96JP0 617 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 BMFQ96LC9 184 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 RNF157Q96PX1 679 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 ZDHHC6Q9H6R6 413 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 UCKL1Q9NWZ5 548 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 HECAQ9UBI9 543 aaPredicted RBP18.16■□□□□ 0.5
VAT1-208ENST00000590924 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 EFR3BQ9Y2G0 817 aa18.16■□□□□ 0.5
VAT1-208ENST00000590924 GSRP00390 522 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 KRT1P04264 644 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 GIMD1P0DJR0 217 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 TNNT1P13805 278 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 ZFXP17010 805 aaPredicted RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 AMPD1P23109 780 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 SERPINB6P35237 376 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 CETN2P41208 172 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 DAB2P98082 770 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 E2F1Q01094 437 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 MMRN1Q13201 1228 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 COL9A2Q14055 689 aaPredicted RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 AFMIDQ63HM1 303 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 Q6ZSR6 202 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 PTAR1Q7Z6K3 402 aaPredicted RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 LRRC49Q8IUZ0 686 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 DCBLD1Q8N8Z6 715 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 OR2AP1Q8NGE2 309 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 PCDH19Q8TAB3 1148 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 KRT35Q92764 455 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 RAB7BQ96AH8 199 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 MAK16Q9BXY0 300 aaKnown RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 KLC2Q9H0B6 622 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 NOL6Q9H6R4 1146 aaKnown RBP18.15■□□□□ 0.5
VAT1-208ENST00000590924 LRRC19Q9H756 370 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 PYCARDQ9ULZ3 195 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 HPCAL4Q9UM19 191 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 CLCA2Q9UQC9 943 aa18.15■□□□□ 0.5
VAT1-208ENST00000590924 KIF26BQ2KJY2 2108 aa18.14■□□□□ 0.5
VAT1-208ENST00000590924 POM121BA6NF01 834 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 TSPAN6O43657 245 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 FTCDO95954 541 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 PAK4O96013 591 aaPredicted RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 MSNP26038 577 aaKnown RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 ABL2P42684 1182 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 CDKN2BP42772 138 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 HNRNPKP61978 463 aaKnown RBP eCLIP18.14■□□□□ 0.49
VAT1-208ENST00000590924 SNRPD1P62314 119 aaKnown RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 PAFAH1B3Q15102 231 aaKnown RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 ZNF805Q5CZA5 627 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 TFDP3Q5H9I0 405 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 MEI1Q5TIA1 1274 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 ASB12Q8WXK4 309 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 VOPP1Q96AW1 172 aa18.14■□□□□ 0.49
VAT1-208ENST00000590924 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.49
VAT1-208ENST00000590924 LENG8Q96PV6 779 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms