RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 P4HA2O15460 535 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 GSRP00390 522 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PRKCGP05129 697 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PCCBP05166 539 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PNMA6AP0CW24 399 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 FLT3P36888 993 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PEX5P50542 639 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 MTA1Q13330 715 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 C2CD6Q53TS8 623 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 SPECC1LQ69YQ0 1117 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 ZNF783Q6ZMS7 281 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 FAM131BQ86XD5 332 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 ZNF397Q8NF99 534 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 ART4Q93070 314 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 CCDC74BQ96LY2 380 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 CRACR2AQ9BSW2 395 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM9Q9P0T7 183 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 RP1L1Q8IWN7 2480 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 CSMD1Q96PZ7 3565 aa12.88□□□□□ -0.35
PRKCSH-210ENST00000589990 FAM72CH0Y354 149 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PIGNO95427 931 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 CPNE6O95741 557 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TNFP01375 233 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 KRT7P08729 469 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 OAS2P29728 719 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 CETN1Q12798 172 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 FAM72AQ5TYM5 149 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 FAM72DQ6L9T8 149 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PIM3Q86V86 326 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 FAM72BQ86X60 149 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TRIM59Q8IWR1 403 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 CACNA2D3Q8IZS8 1091 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PELI3Q8N2H9 469 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PATE1Q8WXA2 126 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 C1QTNF7Q9BXJ2 289 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 DPEP2Q9H4A9 486 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 DGKBQ9Y6T7 804 aa12.87□□□□□ -0.35
PRKCSH-210ENST00000589990 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 TOR1BO14657 336 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 NUDT21O43809 227 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 RAD1O60671 282 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 TMCC1O94876 653 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 PNLIPP16233 465 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 SLC9A1P19634 815 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 HTR1BP28222 390 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 CD1CP29017 333 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 CSF2RBP32927 897 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 CD97P48960 835 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 POLD3Q15054 466 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 DEFB109BQ30KR1 87 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 BNIPLQ7Z465 357 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 EXOC2Q96KP1 924 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 CFAP57Q96MR6 1250 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 SUDS3Q9H7L9 328 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 PCDH12Q9NPG4 1184 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
PRKCSH-210ENST00000589990 LOC101059948A0A1B0GTJ6 334 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 ZNF891A8MT65 544 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 BMP6P22004 513 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 LIG3P49916 1009 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 CDC20Q12834 499 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 MANEALQ5VSG8 457 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 ANKS6Q68DC2 871 aa12.85□□□□□ -0.35
PRKCSH-210ENST00000589990 TRIM65Q6PJ69 517 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms