RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TCAF2A6NFQ2 919 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 B4DGG1 531 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 PPP1R3GB7ZBB8 358 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 PRSS44E7EML9 344 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SNAP91O60641 907 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 STK17BO94768 372 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SERPINC1P01008 464 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 PRNPP04156 253 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 RRM1P23921 792 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 MPSTP25325 297 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 EEF1GP26641 437 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 PIK3CAP42336 1068 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 PGDP52209 483 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 AP3M2P53677 418 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 MAZP56270 477 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 KRTAP10-9P60411 292 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 CCDC15Q0P6D6 951 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SGCGQ13326 291 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SEMA5AQ13591 1074 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 ARHGEF7Q14155 803 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 ZRSR2Q15696 482 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 NFIL3Q16649 462 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 GOLGA7BQ2TAP0 167 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 FKBP15Q5T1M5 1219 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 CPZQ66K79 652 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SLC6A19Q695T7 634 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 DPY19L3Q6ZPD9 716 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 C11orf57Q6ZUT1 292 aaPredicted RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 GDF7Q7Z4P5 450 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 CHSY1Q86X52 802 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 C17orf82Q86X59 251 aaPredicted RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 GKN2Q86XP6 184 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 FAM129CQ86XR2 697 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 SLC9A9Q8IVB4 645 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 C12orf56Q8IXR9 622 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 FAM186BQ8IYM0 893 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 TP53I13Q8NBR0 393 aaPredicted RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 RNF214Q8ND24 703 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 DQX1Q8TE96 717 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 RNF31Q96EP0 1072 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 DDX50Q9BQ39 737 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 TRIM8Q9BZR9 551 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 IMPG2Q9BZV3 1241 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 NIF3L1Q9GZT8 377 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 TNKS2Q9H2K2 1166 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 LRRC4Q9HBW1 653 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 APMAPQ9HDC9 416 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 CNGB3Q9NQW8 809 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 ASF1BQ9NVP2 202 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 IL36AQ9UHA7 158 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 PHTF1Q9UMS5 762 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 POLHQ9Y253 713 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 RPS6KL1Q9Y6S9 549 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 MDC1Q14676 2089 aaKnown RBP6.16□□□□□ -1.42
VPS25-204ENST00000589577 FBN1P35555 2871 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 TRIM49BA6NDI0 452 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 ANKUB1A6NFN9 424 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 PIK3R2O00459 728 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 MAPK13O15264 365 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TSPAN6O43657 245 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 ZG16O60844 167 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 RASGRP1O95267 797 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 LTFP02788 710 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TPM1P09493 284 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CTSEP14091 401 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CD44P16070 742 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 TRIM21P19474 475 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 BMP6P22004 513 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 ALDH4A1P30038 563 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 L1CAMP32004 1257 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 BLKP51451 505 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 RAB15P59190 212 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 SRP54P61011 504 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 CHAF1BQ13112 559 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 NNTQ13423 1086 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TRA2AQ13595 282 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS25-204ENST00000589577 IRF4Q15306 451 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CLPPQ16740 277 aaPredicted RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 DCAF17Q5H9S7 520 aaPredicted RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 NKAIN2Q5VXU1 208 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 SPECC1LQ69YQ0 1117 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 ANKRD40Q6AI12 368 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TTI2Q6NXR4 508 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 C22orf39Q6P5X5 142 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 RD3Q7Z3Z2 195 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TAC4Q86UU9 113 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 ZSCAN30Q86W11 494 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 NRSN1Q8IZ57 195 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 SIX6OS1Q8N1H7 587 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CCDC112Q8NEF3 446 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 FAM46DQ8NEK8 389 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 OR4D9Q8NGE8 314 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CCL4L1Q8NHW4 92 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TAS1R2Q8TE23 839 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 RNF34Q969K3 372 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 PPP1R16AQ96I34 528 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TEFMQ96QE5 360 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms