RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 RPLP0P05388 317 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 ALPIP09923 528 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 PLA2G2AP14555 144 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 PSMA2P25787 234 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 LIG3P49916 1009 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 HK3P52790 923 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 RHDQ02161 417 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 LY6DQ14210 128 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 INPP5AQ14642 412 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 NFATC4Q14934 902 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 TMEM52BQ4KMG9 183 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 GKN2Q86XP6 184 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 CAMK1DQ8IU85 385 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 WDR36Q8NI36 951 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 PDXPQ96GD0 296 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 GFM1Q96RP9 751 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 CNPY3Q9BT09 278 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 APOOQ9BUR5 198 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 CINPQ9BW66 212 aaPredicted RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 FOXP3Q9BZS1 431 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 DHX35Q9H5Z1 703 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 RABGEF1Q9UJ41 708 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 MFHAS1Q9Y4C4 1052 aa13.82□□□□□ -0.2
HDAC5-208ENST00000588419 GCN1Q92616 2671 aaKnown RBP13.82□□□□□ -0.2
HDAC5-208ENST00000588419 ARHGAP42A6NI28 874 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 A8MX80 341 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 TOR1BO14657 336 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
HDAC5-208ENST00000588419 RGRP47804 291 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 PDX1P52945 283 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 SRP54P61011 504 aaKnown RBP13.81□□□□□ -0.2
HDAC5-208ENST00000588419 MYL5Q02045 173 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 OGDHQ02218 1023 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 VAC14Q08AM6 782 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 UGP2Q16851 508 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 B3GNT8Q7Z7M8 397 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 ZSWIM9Q86XI8 627 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 Q8N9G6 341 aaPredicted RBP13.81□□□□□ -0.2
HDAC5-208ENST00000588419 LSM14AQ8ND56 463 aaKnown RBP13.81□□□□□ -0.2
HDAC5-208ENST00000588419 WDR48Q8TAF3 677 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 PRR11Q96HE9 360 aaPredicted RBP13.81□□□□□ -0.2
HDAC5-208ENST00000588419 TBATAQ96M53 351 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 WDR92Q96MX6 357 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 SLC46A1Q96NT5 459 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 DPH1Q9BZG8 443 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 PDFQ9HBH1 243 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 PCSK1NQ9UHG2 260 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 ATP8A1Q9Y2Q0 1164 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 PCDHGA8Q9Y5G5 932 aa13.81□□□□□ -0.2
HDAC5-208ENST00000588419 TCRBV5S1A1TA0A578 114 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 WASH4PA8MWX3 477 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 B4DGG1 531 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PRAMEF11O60813 436 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PALMO75781 387 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TNFP01375 233 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 ELFN1P0C7U0 828 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 KRT10P13645 584 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 HGFP14210 728 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 SERPINA4P29622 427 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 MMP12P39900 470 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PEX5P50542 639 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PAPOLAP51003 745 aaKnown RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 AIF1P55008 147 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 CCL7P80098 99 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 GRM3Q14832 879 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 STX1AQ16623 288 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 CA9Q16790 459 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PPP6R3Q5H9R7 873 aaPredicted RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 KCTD16Q68DU8 428 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 ACAD10Q6JQN1 1059 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 CCDC81Q6ZN84 652 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 SRLQ86TD4 932 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 MCOLN2Q8IZK6 566 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 PLA2G15Q8NCC3 412 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 ATL2Q8NHH9 583 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 CCDC97Q96F63 343 aaPredicted RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 SNRNP25Q9BV90 132 aaKnown RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 SEMA4CQ9C0C4 833 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 SLC39A8Q9C0K1 460 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 LRRC19Q9H756 370 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 ATP13A3Q9H7F0 1226 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 MRPL40Q9NQ50 206 aaKnown RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TAS2R14Q9NYV8 317 aa13.8□□□□□ -0.2
HDAC5-208ENST00000588419 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
HDAC5-208ENST00000588419 TSPAN11A1L157 253 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 CDRT15L2A8MXV6 281 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 D6RAR5 112 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms