RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 GATAD2BQ8WXI9 593 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 FUBP3Q96I24 572 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-221ENST00000582448 SMOQ99835 787 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 FAM129AQ9BZQ8 928 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-221ENST00000582448 KLHL11Q9NVR0 708 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 TRPM5Q9NZQ8 1165 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
SS18-221ENST00000582448 NFU1Q9UMS0 254 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 CPQQ9Y646 472 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 LAMA1P25391 3075 aa10.47□□□□□ -0.73
SS18-221ENST00000582448 ASPMQ8IZT6 3477 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
SS18-221ENST00000582448 KAT7O95251 611 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 LTFP02788 710 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 CYP17A1P05093 508 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.73
SS18-221ENST00000582448 ZFXP17010 805 aaPredicted RBP10.46□□□□□ -0.73
SS18-221ENST00000582448 WASP42768 502 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 DAOAP59103 153 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SEMA3BQ13214 749 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SNX1Q13596 522 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 LLGL1Q15334 1064 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 TAF5Q15542 800 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 DUOXA1Q1HG43 343 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 C15orf59Q2T9L4 293 aaPredicted RBP10.46□□□□□ -0.73
SS18-221ENST00000582448 GAB4Q2WGN9 574 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 RAB41Q5JT25 222 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 KCNT1Q5JUK3 1230 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SFRP5Q5T4F7 317 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ERMARDQ5T6L9 678 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SLC6A19Q695T7 634 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SLC23A3Q6PIS1 610 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
SS18-221ENST00000582448 DEFB106AQ8N104 65 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SCML4Q8N228 414 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 CCDC89Q8N998 374 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 CASKIN2Q8WXE0 1202 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 CAMK1GQ96NX5 476 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ULBP1Q9BZM6 244 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 RNF38Q9H0F5 515 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 DPH5Q9H2P9 285 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 VIPAS39Q9H9C1 493 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 PRDM16Q9HAZ2 1276 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ARHGEF4Q9NR80 690 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 ZNF148Q9UQR1 794 aa10.46□□□□□ -0.73
SS18-221ENST00000582448 MYH10P35580 1976 aa10.46□□□□□ -0.74
SS18-221ENST00000582448 NUP205Q92621 2012 aa10.46□□□□□ -0.74
SS18-221ENST00000582448 ATRXP46100 2492 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 TCRBV7S2A1N4TA0A589 114 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 ESYT3A0FGR9 886 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 UPK3BL1B0FP48 263 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 UPK3BL2E5RIL1 263 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 MCF2LO15068 1137 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 MDM4O15151 490 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 DAPK3O43293 454 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 BEST1O76090 585 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 MBL2P11226 248 aaPredicted RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 KRT10P13645 584 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 TCF4P15884 667 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 IL1R2P27930 398 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 ARL4AP40617 200 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 AIF1P55008 147 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 DRG2P55039 364 aaKnown RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 DYNLT1P63172 113 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 CAV1Q03135 178 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 SCAPQ12770 1279 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 KLF1Q13351 362 aaPredicted RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 CASP8Q14790 479 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 TMCO4Q5TGY1 634 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 DRICH1Q6PGQ1 229 aaPredicted RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 RHBDF2Q6PJF5 856 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 DENND5BQ6ZUT9 1274 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 C22orf34Q6ZV56 151 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 PIP4P1Q86T03 277 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 PNPLA1Q8N8W4 532 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 CEP76Q8TAP6 659 aa10.45□□□□□ -0.74
SS18-221ENST00000582448 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
SS18-221ENST00000582448 CLEC4CQ8WTT0 213 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms