RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	DFFA	O00273	331 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	EEF2K	O00418	725 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RIOK3	O14730	519 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FGF10	O15520	208 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PRAMEF11	O60813	436 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATP1A3	P13637	1013 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TNFAIP3	P21580	790 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MMP12	P39900	470 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HK3	P52790	923 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PDX1	P52945	283 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SRP54	P61011	504 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NFATC4	Q14934	902 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	STX1A	Q16623	288 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ERAP2	Q6P179	960 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RBM43	Q6ZSC3	357 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	B3GNT8	Q7Z7M8	397 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SDR16C5	Q8N3Y7	309 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AOPEP	Q8N6M6	819 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PLA2G15	Q8NCC3	412 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TSEN2	Q8NCE0	465 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TPCN2	Q8NHX9	752 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NAT6	Q93015	286 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CCDC74A	Q96AQ1	378 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PDXP	Q96GD0	296 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PRR11	Q96HE9	360 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SLC46A1	Q96NT5	459 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ERGIC2	Q96RQ1	377 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KCTD15	Q96SI1	283 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	APOO	Q9BUR5	198 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SNRNP25	Q9BV90	132 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	EDEM3	Q9BZQ6	932 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FOXP3	Q9BZS1	431 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TRIM7	Q9C029	511 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HSD3B7	Q9H2F3	369 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	EPB41L5	Q9HCM4	733 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KL	Q9UEF7	1012 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GPR34	Q9UPC5	381 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATP8A1	Q9Y2Q0	1164 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATM	Q13315	3056 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KALRN	O60229	2985 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TSPAN11	A1L157	253 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TTC24	A2A3L6	582 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARHGAP42	A6NI28	874 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TK2	O00142	265 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TOR1B	O14657	336 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TEX33	O43247	280 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DAPK3	O43293	454 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TCEA3	O75764	348 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PALM	O75781	387 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TNFSF15	O95150	251 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RASGRP1	O95267	797 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ALPI	P09923	528 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FER	P16591	822 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DES	P17661	470 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HTR1B	P28222	390 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	BLK	P51451	505 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AIF1	P55008	147 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CCL7	P80098	99 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MAMLD1	Q13495	774 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NCAPH	Q15003	741 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ELOC	Q15369	112 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	APTX	Q7Z2E3	356 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SRL	Q86TD4	932 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SFTPA2	Q8IWL1	248 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TP53INP2	Q8IXH6	220 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZNF843	Q8N446	348 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FSTL5	Q8N475	847 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARFGAP1	Q8N6T3	406 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NPW	Q8N729	165 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARL10	Q8N8L6	244 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114		Q8N9G6	341 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	WDR36	Q8NI36	951 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SCG3	Q8WXD2	468 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TBATA	Q96M53	351 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CINP	Q9BW66	212 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATP13A3	Q9H7F0	1226 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SP110	Q9HB58	689 aa		11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MRPL40	Q9NQ50	206 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LRP4	O75096	1905 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	NTN3	O00634	580 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RPLP0	P05388	317 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ELFN1	P0C7U0	828 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	KRT10	P13645	584 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	HGF	P14210	728 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ERCC2	P18074	760 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SERPINA4	P29622	427 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PEX5	P50542	639 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SCNN1B	P51168	640 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	NDST2	P52849	883 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	UCN	P55089	124 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CFHR1	Q03591	330 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RALGDS	Q12967	914 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LY6D	Q14210	128 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GRM3	Q14832	879 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ZSCAN23	Q3MJ62	389 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ERMARD	Q5T6L9	678 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	KIAA1614	Q5VZ46	1190 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	BRAT1	Q6PJG6	821 aa		11.7	□□□□□ -0.54

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