RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CARD6Q9BX69 1037 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 FRMD8Q9BZ67 464 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 PCED1AQ9H1Q7 454 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ETNK1Q9HBU6 452 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ITM2CQ9NQX7 267 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 SPATA6Q9NWH7 488 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 C2orf42Q9NWW7 574 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ZDBF2Q9HCK1 2354 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 UPK3BL1B0FP48 263 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ANKRD66B4E2M5 251 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 UPK3BL2E5RIL1 263 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 H0Y858 1186 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 DNALI1O14645 258 aaPredicted RBP10.47□□□□□ -0.73
CCDC47-203ENST00000580986 AREL1O15033 823 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 MID1O15344 667 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 TTI1O43156 1089 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 RAD51CO43502 376 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 BNIP3LO60238 219 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 GJB3O75712 270 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 SEC31AO94979 1220 aaKnown RBP10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PIGNO95427 931 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 CPP00450 1065 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 MLNP12872 115 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ADRB3P13945 408 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ETS1P14921 441 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 OXTRP30559 389 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 GKP32189 559 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 P2RY2P41231 377 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PSMD8P48556 350 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 KCNC4Q03721 635 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ELP6Q0PNE2 266 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 GPS1Q13098 491 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 KCNJ11Q14654 390 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 MORF4L2Q15014 288 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 SLC1A5Q15758 541 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 TMEM31Q5JXX7 168 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 CFAP58Q5T655 872 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PIP5KL1Q5T9C9 394 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 AGBL4Q5VU57 503 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 DUPD1Q68J44 220 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 CCDC70Q6NSX1 233 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 USP45Q70EL2 814 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PARS2Q7L3T8 475 aaKnown RBP10.47□□□□□ -0.73
CCDC47-203ENST00000580986 C11orf74Q86VG3 221 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 WDR5BQ86VZ2 330 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 AADATQ8N5Z0 425 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 MCUQ8NE86 351 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 HMGB4Q8WW32 186 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PIH1D2Q8WWB5 315 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 RUBCNQ92622 972 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 IFT43Q96FT9 208 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 SCRN2Q96FV2 425 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 HHIPQ96QV1 700 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PRRX2Q99811 253 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 MLPHQ9BV36 600 aaPredicted RBP10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PHACTR1Q9C0D0 580 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 TRABDQ9H4I3 376 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 SGK2Q9HBY8 427 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 HACD3Q9P035 362 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 WHRNQ9P202 907 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 ASIC3Q9UHC3 531 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 SHOC2Q9UQ13 582 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 NCKAP1Q9Y2A7 1128 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 UTP11Q9Y3A2 253 aaKnown RBP10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PCDHB9Q9Y5E1 797 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 PCDHGC4Q9Y5F7 938 aa10.47□□□□□ -0.73
CCDC47-203ENST00000580986 A0A0J9YYE9 177 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 E7EVH7 732 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 PLRG1O43660 514 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 PMPCBO75439 489 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 TRBC1P01850 177 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 APRTP07741 180 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ATXN1LP0C7T5 689 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF30P17039 623 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ITIH2P19823 946 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 CNR2P34972 360 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 TPMTP51580 245 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 BASP1P80723 227 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 SARNPP82979 210 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 CAV1Q03135 178 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 RNASEH2BQ5TBB1 312 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ANO7Q6IWH7 933 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 PPP1R21Q6ZMI0 780 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 LONP2Q86WA8 852 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 PPIL6Q8IXY8 311 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 MAML2Q8IZL2 1156 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 NAT8LQ8N9F0 302 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 NOA1Q8NC60 698 aaKnown RBP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 CPT1BQ92523 772 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ARRDC3Q96B67 414 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 SNF8Q96H20 258 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 OMDQ99983 421 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 TBL1YQ9BQ87 522 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 MAGEE1Q9HCI5 957 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 PREBQ9HCU5 417 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms