RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ARID1BQ8NFD5 2236 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 ASXL3Q9C0F0 2248 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 SHROOM3Q8TF72 1996 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 HELZ2Q9BYK8 2649 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 SETXQ7Z333 2677 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 DOCK9Q9BZ29 2069 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 K7ESM1 405 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 DFFAO00273 331 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 USP12O75317 370 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 CSO75390 466 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 NEBLO76041 1014 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 TMCC1O94876 653 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 POP4O95707 220 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 GSRP00390 522 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 AMPD1P23109 780 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 GJC1P36383 396 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 NOP2P46087 812 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 DUSP3P51452 185 aaPredicted RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 NEK3P51956 506 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 HNRNPKP61978 463 aaKnown RBP eCLIP16.19■□□□□ 0.18
VAPA-204ENST00000577901 RPS21P63220 83 aaKnown RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 GABREP78334 506 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 RAD51Q06609 339 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 PDK2Q15119 407 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 AFMIDQ63HM1 303 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 OR2AP1Q8NGE2 309 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 FAM71BQ8TC56 605 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 HIC2Q96JB3 615 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 DUSP23Q9BVJ7 150 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 SLC17A9Q9BYT1 436 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 EVA1BQ9NVM1 165 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 HS3ST3A1Q9Y663 406 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 EPN1Q9Y6I3 576 aaPredicted RBP16.19■□□□□ 0.18
VAPA-204ENST00000577901 WASF2Q9Y6W5 498 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 MGAQ8IWI9 3026 aa16.19■□□□□ 0.18
VAPA-204ENST00000577901 LY6G6EA0A0G2JKS1 128 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 POM121BA6NF01 834 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 J3KR12 359 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 PRAMEF11O60813 436 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
VAPA-204ENST00000577901 IGSF6O95976 241 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 PAK4O96013 591 aaPredicted RBP16.18■□□□□ 0.18
VAPA-204ENST00000577901 ADRB3P13945 408 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 ITGB7P26010 798 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 SERPINB6P35237 376 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 SLC1A1P43005 524 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 LSSP48449 732 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 RHOAP61586 193 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 FGL2Q14314 439 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 FZD2Q14332 565 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 MYLK3Q32MK0 819 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 BROXQ5VW32 411 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 KIAA1161Q6NSJ0 714 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 PCSK4Q6UW60 755 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 KYAT3Q6YP21 454 aaKnown RBP16.18■□□□□ 0.18
VAPA-204ENST00000577901 NPWQ8N729 165 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 ZNF548Q8NEK5 533 aaPredicted RBP16.18■□□□□ 0.18
VAPA-204ENST00000577901 IFI44Q8TCB0 444 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 MAPK15Q8TD08 544 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 FEM1CQ96JP0 617 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 GDAP1L1Q96MZ0 367 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 OSBPL1AQ9BXW6 950 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 ZDHHC6Q9H6R6 413 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 POLR1BQ9H9Y6 1135 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 SP110Q9HB58 689 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 PDFQ9HBH1 243 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 GPR27Q9NS67 375 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 FADS3Q9Y5Q0 445 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 U3KQA8 63 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 CFAP46Q8IYW2 2715 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 CHD5Q8TDI0 1954 aa16.18■□□□□ 0.18
VAPA-204ENST00000577901 SPTY2D1-AS1A0A0U1RR47 76 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 SOWAHDA6NJG2 315 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 H3BM21 787 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 KRIT1O00522 736 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 RAD51BO15315 384 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 PALMO75781 387 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 NDUFA10O95299 355 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 CSF2P04141 144 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 PLA2G2AP14555 144 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 FECHP22830 423 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 IL4RP24394 825 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 RABIFP47224 123 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ARSEP51690 589 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 TMPRSS3P57727 454 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 TAS2R40P59535 323 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ERVPABLB-1P60509 514 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 IL10RBQ08334 325 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 RFTN1Q14699 578 aaPredicted RBP16.17■□□□□ 0.18
VAPA-204ENST00000577901 CYTH1Q15438 398 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ATP13A4Q4VNC1 1196 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ZCCHC8Q6NZY4 707 aaKnown RBP16.17■□□□□ 0.18
VAPA-204ENST00000577901 ZNF605Q86T29 641 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ARHGAP12Q8IWW6 846 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 BAG1Q99933 345 aaPredicted RBP16.17■□□□□ 0.18
VAPA-204ENST00000577901 IPO11Q9UI26 975 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms