RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FAM110BQ8TC76 370 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 DQX1Q8TE96 717 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 MRGPRX2Q96LB1 330 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 MRM3Q9HC36 420 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 OLAHQ9NV23 265 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 TMEM181Q9P2C4 612 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 CNOT6Q9ULM6 557 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 UBFD1O14562 309 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TRMUO75648 421 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 H6PDO95479 791 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CCDC166P0CW27 439 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ZNF23P17027 643 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 PITRM1Q5JRX3 1037 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 RANBP10Q6VN20 620 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TRIML2Q8N7C3 387 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 PTCD2Q8WV60 388 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 DUS3LQ96G46 650 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 MAML3Q96JK9 1138 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 UHRF1Q96T88 793 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 FSD1LQ9BXM9 530 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CAAP1Q9H8G2 361 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 EML4Q9HC35 981 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ENTPD7Q9NQZ7 604 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 MATN3O15232 486 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 F2P00734 622 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 PAMP19021 973 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TSPAN8P19075 237 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 LHX1P48742 406 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CLEC6AQ6EIG7 209 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CCDC117Q8IWD4 279 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 NLGN2Q8NFZ4 835 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ANKRD49Q8WVL7 239 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 FBRSL1Q9HCM7 1045 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CROTQ9UKG9 612 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TANC1Q9C0D5 1861 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ATP6AP2A0A1C7CYW4 349 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 H3BNH8 94 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 NRP2O60462 931 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TIPRLO75663 272 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ATP6AP2O75787 350 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 CKMT2P17540 419 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ADAM17P78536 824 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 AGAP9Q5VTM2 703 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 C8orf82Q6P1X6 216 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 C3orf58Q8NDZ4 430 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 RANBP9Q96S59 729 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 HAUS8Q9BT25 410 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 RBM22Q9NW64 420 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 GALNT8Q9NY28 637 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 RGS17Q9UGC6 210 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 IPO11Q9UI26 975 aaKnown RBP19.18■□□□□ 0.66
SCARF1-206ENST00000573852 TRAF6Q9Y4K3 522 aa19.18■□□□□ 0.66
SCARF1-206ENST00000573852 ZNF839A8K0R7 811 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 HTRA2O43464 458 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-206ENST00000573852 LTA4HP09960 611 aaKnown RBP19.17■□□□□ 0.66
SCARF1-206ENST00000573852 CLCNKBP51801 687 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 AFAP1L2Q8N4X5 818 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 SMARCD1Q96GM5 515 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 SLC25A23Q9BV35 468 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 GSTO2Q9H4Y5 243 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 SPON1Q9HCB6 807 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 TIMMDC1Q9NPL8 285 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 PTCH2Q9Y6C5 1203 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 ALDH3B2P48448 385 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 SLC7A2P52569 658 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 PCSK7Q16549 785 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 IQSEC1Q6DN90 963 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 FAM45BPQ6NSW5 357 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 FUNDC1Q8IVP5 155 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 FAM45AQ8TCE6 357 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 CCDC126Q96EE4 140 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 TINF2Q9BSI4 451 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 ABHD16BQ9H3Z7 469 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 DUS2Q9NX74 493 aaKnown RBP19.17■□□□□ 0.66
SCARF1-206ENST00000573852 THEGQ9P2T0 379 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 MYRFQ9Y2G1 1151 aa19.17■□□□□ 0.66
SCARF1-206ENST00000573852 DNAH12Q6ZR08 3092 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 SRP72O76094 671 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 KCNC1P48547 511 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 SAMD4BQ5PRF9 694 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 ARTNQ5T4W7 220 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 GAB3Q8WWW8 586 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 PPWD1Q96BP3 646 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 C3orf30Q96M34 536 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 MRGBPQ9NV56 204 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 RSL24D1Q9UHA3 163 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 MTF2Q9Y483 593 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 NYNRINQ9P2P1 1898 aaKnown RBP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 SOCS2O14508 198 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 NDST2P52849 883 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 MFSD10Q14728 455 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 PRAMEF19Q5SWL8 479 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 KRT80Q6KB66 452 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 LARP4Q71RC2 724 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCARF1-206ENST00000573852 TMEM86AQ8N2M4 240 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 CANT1Q8WVQ1 401 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 PBXIP1Q96AQ6 731 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 LRCH3Q96II8 777 aa19.16■□□□□ 0.66
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