RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SPATS2Q86XZ4 545 aaKnown RBP9.18□□□□□ -0.94
NDE1-207ENST00000573203 GATAD2AQ86YP4 633 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 NPWQ8N729 165 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 TMEM145Q8NBT3 493 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 UBXN4Q92575 508 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 CSPG4P5Q96PW8 444 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 CINPQ9BW66 212 aaPredicted RBP9.18□□□□□ -0.94
NDE1-207ENST00000573203 SCNM1Q9BWG6 230 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 CALN1Q9BXU9 219 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 PACSIN1Q9BY11 444 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 CPEB1Q9BZB8 566 aaKnown RBP9.18□□□□□ -0.94
NDE1-207ENST00000573203 ERVMER34-1Q9H9K5 563 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 PCDH18Q9HCL0 1135 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 IPO11Q9UI26 975 aaKnown RBP9.18□□□□□ -0.94
NDE1-207ENST00000573203 APOBEC2Q9Y235 224 aaKnown RBP9.18□□□□□ -0.94
NDE1-207ENST00000573203 ITM2BQ9Y287 266 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 BTBD3Q9Y2F9 522 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 DUSP10Q9Y6W6 482 aa9.18□□□□□ -0.94
NDE1-207ENST00000573203 IGLON5A6NGN9 336 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 A6NNZ2 444 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 PIGNO95427 931 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 TIMP2P16035 220 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 EPHA8P29322 1005 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 CLDN2P57739 230 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 FGL2Q14314 439 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 SHBQ15464 509 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 ZFYVE27Q5T4F4 411 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 GCNT7Q6ZNI0 430 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 ARHGAP36Q6ZRI8 547 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 PTAR1Q7Z6K3 402 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 GLRX5Q86SX6 157 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 CHCHD4Q8N4Q1 142 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 PNPLA1Q8N8W4 532 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 BAHD1Q8TBE0 780 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 FAM174AQ8TBP5 190 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 CXorf40AQ8TE69 158 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 CARD6Q9BX69 1037 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 ATP13A3Q9H7F0 1226 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 ETNK2Q9NVF9 386 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 RCOR3Q9P2K3 495 aaPredicted RBP9.17□□□□□ -0.94
NDE1-207ENST00000573203 DKK3Q9UBP4 350 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 TRIM10Q9UDY6 481 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 FTSJ1Q9UET6 329 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 LCMT1Q9UIC8 334 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 GGT7Q9UJ14 662 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 HS3ST3A1Q9Y663 406 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 CHD8Q9HCK8 2581 aa9.17□□□□□ -0.94
NDE1-207ENST00000573203 LRRK1Q38SD2 2015 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 MACROD2A1Z1Q3 448 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 CTAGE15A4D2H0 777 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 TMEM110-MUSTN1A8MSY1 372 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 FPGTO14772 594 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 AREL1O15033 823 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 TNFSF14O43557 240 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 MMP20O60882 483 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 PROSCO94903 275 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
NDE1-207ENST00000573203 CTAGE8P0CG41 777 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SERPINA4P29622 427 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SERPINB6P35237 376 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 RXRGP48443 463 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 CSNK1DP48730 415 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SCNN1BP51168 640 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 RENBPP51606 427 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SUOXP51687 545 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 CKAP4Q07065 602 aaKnown RBP9.16□□□□□ -0.94
NDE1-207ENST00000573203 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 ELP6Q0PNE2 266 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 BNIP3Q12983 259 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 ZNF235Q14590 738 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 MESDQ14696 234 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
NDE1-207ENST00000573203 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 Q6ZSR6 202 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 ABI3BPQ7Z7G0 1075 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SRLQ86TD4 932 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 CTAGE6Q86UF2 777 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SLCO6A1Q86UG4 719 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 DCP2Q8IU60 420 aaKnown RBP9.16□□□□□ -0.94
NDE1-207ENST00000573203 CTAGE4Q8IX94 777 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SYCE1Q8N0S2 351 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 BBS5Q8N3I7 341 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 ATPAF2Q8N5M1 289 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 EID2Q8N6I1 236 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 KCTD6Q8NC69 237 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 OR13H1Q8NG92 308 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
NDE1-207ENST00000573203 SAP25Q8TEE9 199 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms