RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 FYB2Q5VWT5 728 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TAPT1Q6NXT6 567 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 KYAT3Q6YP21 454 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 RAPH1Q70E73 1250 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PPTC7Q8NI37 304 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 JOSD2Q8TAC2 188 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 C9orf72Q96LT7 481 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 YME1L1Q96TA2 773 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 FDXACB1Q9BRP7 624 aaPredicted RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 WASH6PQ9NQA3 447 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 HESX1Q9UBX0 185 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SHOC2Q9UQ13 582 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 EMC9Q9Y3B6 208 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SIAH2O43255 324 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SUPT3HO75486 399 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TM7SF2O76062 418 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 FGF18O76093 207 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 HMGCRP04035 888 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CD48P09326 243 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CD9P21926 228 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 RPA3P35244 121 aaPredicted RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 MECP2P51608 486 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 SLC12A2P55011 1212 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TUBA1BP68363 451 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CCNA1P78396 465 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 MED21Q13503 144 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ZNF792Q3KQV3 632 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 MMEL1Q495T6 779 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 RNASEH2BQ5TBB1 312 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 MAP3K21Q5TCX8 1036 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 BBS12Q6ZW61 710 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TUBA1AQ71U36 451 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 MAMDC2Q7Z304 686 aaPredicted RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 NANOGNBQ7Z5D8 188 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PRUNE1Q86TP1 453 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 LRRC6Q86X45 466 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CROCCP3Q8IVE0 287 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 METTL25Q8N6Q8 603 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 GLIS1Q8NBF1 620 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 MCRS1Q96EZ8 462 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 BTBD9Q96Q07 612 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CPXM1Q96SM3 734 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SENP6Q9GZR1 1112 aaPredicted RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 ELOVL4Q9GZR5 314 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SMYD3Q9H7B4 428 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SAYSD1Q9NPB0 183 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ARHGEF38Q9NXL2 777 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 STK39Q9UEW8 545 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ZNF711Q9Y462 761 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 HTR3EA5X5Y0 456 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PEX1O43933 1283 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SERPINB7O75635 380 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ERBB2P04626 1255 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 HSPA8P11142 646 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 VCLP18206 1134 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 KDELR1P24390 212 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ALDH9A1P49189 494 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 CDK16Q00536 496 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 SLC1A5Q15758 541 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 FAM110CQ1W6H9 321 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PDCD4Q53EL6 469 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 ZNF362Q5T0B9 420 aaPredicted RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PGBD2Q6P3X8 592 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 RBM44Q6ZP01 1051 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 RIPOR1Q6ZS17 1223 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TMPRSS6Q8IU80 811 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 MARVELD2Q8N4S9 558 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ARFGAP1Q8N6T3 406 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
TCF4-246ENST00000570287 DPF3Q92784 378 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TWNKQ96RR1 684 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 ITGA11Q9UKX5 1188 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 KIAA1257Q9ULG3 409 aa8.12□□□□□ -1.11
TCF4-246ENST00000570287 TRIM43BA6NCK2 446 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 C2orf81A6NN90 581 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 SGK1O00141 431 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 CASQ2O14958 399 aaPredicted RBP8.11□□□□□ -1.11
TCF4-246ENST00000570287 ALOX15BO15296 676 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 DENRO43583 198 aaKnown RBP8.11□□□□□ -1.11
TCF4-246ENST00000570287 TROVE2P10155 538 aaKnown RBP eCLIP8.11□□□□□ -1.11
TCF4-246ENST00000570287 ETS1P14921 441 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 ARF4P18085 180 aaPredicted RBP8.11□□□□□ -1.11
TCF4-246ENST00000570287 IL1R2P27930 398 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 PGM1P36871 562 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 GPD2P43304 727 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 GALK1P51570 392 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 MTTPP55157 894 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 RBP5P82980 135 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 INCA1Q0VD86 236 aa8.11□□□□□ -1.11
TCF4-246ENST00000570287 TMEM132DQ14C87 1099 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms