RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 C1QTNF12Q5T7M4 302 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 SLC22A16Q86VW1 577 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 BEST2Q8NFU1 509 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 BLOC1S5Q8TDH9 187 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 HEXDCQ8WVB3 486 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 CLEC4DQ8WXI8 215 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 FEM1AQ9BSK4 669 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 WDCPQ9H6R7 721 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 HACD3Q9P035 362 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 TEKT2Q9UIF3 430 aa10.97□□□□□ -0.65
PALB2-206ENST00000568219 ECM29Q5VYK3 1845 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 KATNA1O75449 491 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CCNKO75909 580 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 TCEA1P23193 301 aaKnown RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 TUFMP49411 452 aaKnown RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 MAP3K7CLP57077 242 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CYP4F2P78329 520 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CYP4F3Q08477 520 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 RABL3Q5HYI8 236 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 NIPAL1Q6NVV3 410 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 ESRP1Q6NXG1 681 aaKnown RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 ZYG11AQ6WRX3 759 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 LRRC8DQ7L1W4 858 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 FAM126BQ8IXS8 530 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 FAM167AQ96KS9 214 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 PPP1R10Q96QC0 940 aaKnown RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 ENTPD7Q9NQZ7 604 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 RASSF1Q9NS23 344 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 MRGBPQ9NV56 204 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 NUDT5Q9UKK9 219 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 TIMM13Q9Y5L4 95 aaPredicted RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 A6NL46 340 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 VWA5AO00534 786 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CLPXO76031 633 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 ZNF24P17028 368 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CAPGP40121 348 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 DEFA1P59665 94 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 DEFA3P59666 94 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
PALB2-206ENST00000568219 ACVR1CQ8NER5 493 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 ESAMQ96AP7 390 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 MAGED4Q96JG8 741 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 CDT1Q9H211 546 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 RBM22Q9NW64 420 aaKnown RBP eCLIP10.96□□□□□ -0.654e-7■■□□□ 11.6
PALB2-206ENST00000568219 NSMCE4AQ9NXX6 385 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 MOCS1Q9NZB8 636 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 FBXO5Q9UKT4 447 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 PSME2Q9UL46 239 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 FAM50BQ9Y247 325 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 SNX10Q9Y5X0 201 aa10.96□□□□□ -0.65
PALB2-206ENST00000568219 KRBA1A5PL33 1030 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 ASB14A6NK59 587 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 AURKAO14965 403 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 HCRTO43612 131 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 FTH1P02794 183 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 PGK2P07205 417 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.66
PALB2-206ENST00000568219 CD247P20963 164 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 ARRB2P32121 409 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 INPP1P49441 399 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 RPL26P61254 145 aaKnown RBP10.96□□□□□ -0.66
PALB2-206ENST00000568219 TUBA4AP68366 448 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 MTA1Q13330 715 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 CCNYL2Q5T2Q4 361 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 Q6ZNX1 250 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 C15orf39Q6ZRI6 1047 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 PTGR2Q8N8N7 351 aaPredicted RBP10.96□□□□□ -0.66
PALB2-206ENST00000568219 ZHX1-C8orf76Q96EF9 292 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 TMEM74Q96NL1 305 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 HPS4Q9NQG7 708 aa10.96□□□□□ -0.66
PALB2-206ENST00000568219 RBP1P09455 135 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 TKTP29401 623 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 L1CAMP32004 1257 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 LIPEQ05469 1076 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 NFATC3Q12968 1075 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 OR10Q1Q8NGQ4 319 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 BIRC8Q96P09 236 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MRPL45Q9BRJ2 306 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 IL22Q9GZX6 179 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 RHOJQ9H4E5 214 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 RPF2Q9H7B2 306 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 C9IYK1 514 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CLASP2O75122 1294 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 CILPO75339 1184 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 GABBR2O75899 941 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 PIRTP0C851 137 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 AKAP5P24588 427 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 RCVRNP35243 200 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms