RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 SERPINA1P01009 418 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ERBB2P04626 1255 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 NFICP08651 508 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 HOXB8P17481 243 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC18A1P54219 525 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 CDC42P60953 191 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 TRIM32Q13049 653 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 REP15Q6BDI9 236 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 C8orf4Q9NR00 106 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ADGRE2Q9UHX3 823 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 MAGEL2Q9UJ55 1249 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 MRPS7Q9Y2R9 242 aaKnown RBP12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 BBIP1A8MTZ0 92 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 HAT1O14929 419 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 TBX1O43435 398 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 ANGPTL1O95841 491 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 CETPP11597 493 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 IL2P60568 153 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 NRG1Q02297 640 aaPredicted RBP12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 IL18R1Q13478 541 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 SEMA5AQ13591 1074 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZBED5Q49AG3 693 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 TMEM198Q66K66 360 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 TMEM214Q6NUQ4 689 aaKnown RBP12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 PLET1Q6UQ28 207 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 RAB43Q86YS6 212 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 MICALL2Q8IY33 904 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 C12orf29Q8N999 325 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 OR2T12Q8NG77 320 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 HM13Q8TCT9 377 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 VPS35Q96QK1 796 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 OGDHLQ9ULD0 1010 aa12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.42
CSPG4P13-202ENST00000567704 PLOD3O60568 738 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RGS20O76081 388 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ODC1P11926 461 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 TPSB2P20231 275 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 AKAP5P24588 427 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 POLD2P49005 469 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RPL38P63173 70 aaKnown RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 TPSAB1Q15661 275 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 TYSND1Q2T9J0 566 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC9B1Q4ZJI4 515 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZNF549Q6P9A3 640 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 TLDC1Q6P9B6 456 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 C16orf62Q7Z3J2 963 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 LZTR1Q8N653 840 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 LRRC17Q8N6Y2 441 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 DMRTB1Q96MA1 342 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 PRRG3Q9BZD7 231 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 OPTCQ9UBM4 332 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 FETUBQ9UGM5 382 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ITM2AO43736 263 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 STAU1O95793 577 aaKnown RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 CAPGP40121 348 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 YAP1P46937 504 aaKnown RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 FRMD7Q6ZUT3 714 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 NCCRP1Q6ZVX7 275 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLCO2A1Q92959 643 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SKA1Q96BD8 255 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC47A1Q96FL8 570 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ING3Q9NXR8 418 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 PLK2Q9NYY3 685 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 TRPC4Q9UBN4 977 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ING4Q9UNL4 249 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RWDD3Q9Y3V2 267 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 STX16-NPEPL1H3BU86 382 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 AREL1O15033 823 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 USP17L7P0C7H9 530 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 EPB42P16452 691 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 BNC1Q01954 994 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 LIPEQ05469 1076 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 UGCGQ16739 394 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 FAM182AQ5T1J6 154 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 DRICH1Q6PGQ1 229 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 CPSF7Q8N684 471 aaKnown RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 IL31RAQ8NI17 732 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 DCAKDQ8WVC6 231 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 MKL1Q969V6 931 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 DEFB129Q9H1M3 183 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 KLHL31Q9H511 634 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 CBX4O00257 560 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RGS10O43665 173 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 RAMP2O60895 175 aa12.45□□□□□ -0.42
CSPG4P13-202ENST00000567704 INSRRP14616 1297 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms