RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TAB2Q9NYJ8 693 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 MAP1AP78559 2803 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-216ENST00000567071 STAB1Q9NY15 2570 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 RTTNQ86VV8 2226 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 PIPSLA2A3N6 862 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TMEM110-MUSTN1A8MSY1 372 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TSPAN6O43657 245 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 KRT86O43790 486 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 FGFR1OPO95684 399 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 IGLV3-27P01718 113 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 CTSLP07711 333 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SNRPB2P08579 225 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 EPB41P11171 864 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 STAT1P42224 750 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 MTIF2P46199 727 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 PPM1FP49593 454 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 B4GALNT1Q00973 533 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 NNTQ13423 1086 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 MAP7Q14244 749 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 KRT31Q15323 416 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 NFIL3Q16649 462 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TCP11X2Q5H9J9 407 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SLC6A19Q695T7 634 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 NADSYN1Q6IA69 706 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TAF8Q7Z7C8 310 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 CHSY1Q86X52 802 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 RHOT1Q8IXI2 618 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 FAM186BQ8IYM0 893 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 LGI2Q8N0V4 545 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SIX6OS1Q8N1H7 587 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SH2D3CQ8N5H7 860 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 XXYLT1Q8NBI6 393 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 OR4D9Q8NGE8 314 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SEC14L1Q92503 715 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 ZNF516Q92618 1163 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TSACCQ96A04 125 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 SNRNP40Q96DI7 357 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 NUCKS1Q9H1E3 243 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 DPEP2Q9H4A9 486 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 ACSS2Q9NR19 701 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 CGNQ9P2M7 1197 aaKnown RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 IL36AQ9UHA7 158 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 PNMA8BQ9ULN7 279 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 TMEM184BQ9Y519 407 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 FADS3Q9Y5Q0 445 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 KLF2Q9Y5W3 355 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-216ENST00000567071 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
CAPN3-216ENST00000567071 ARHGEF17Q96PE2 2063 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ZSCAN5CA6NGD5 496 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 TMEM200CA6NKL6 621 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 SLC16A3O15427 465 aaKnown RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 MOCS2O96007 188 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 SERPINC1P01008 464 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 TNFP01375 233 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 FURINP09958 794 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 CASP14P31944 242 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 PLK1P53350 603 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ITGA1P56199 1179 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 OR1D5P58170 312 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 SNRPFP62306 86 aaKnown RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 FANCCQ00597 558 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 INCA1Q0VD86 236 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ART3Q13508 389 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 HLTFQ14527 1009 aaKnown RBP eCLIP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 VWA2Q5GFL6 755 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 MSANTD2Q6P1R3 559 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 OGFOD3Q6PK18 319 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 NXPE1Q8N323 547 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 Q8NA96 180 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ATP11CQ8NB49 1132 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ELMO3Q96BJ8 720 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ARHGEF26Q96DR7 871 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 C19orf60Q96EN9 201 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 SPRY4Q9C004 299 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 VPS16Q9H269 839 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ASF1BQ9NVP2 202 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 DMAC2Q9NW81 257 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 IFNKQ9P0W0 207 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 KLQ9UEF7 1012 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 VPS28Q9UK41 221 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 FRMD4BQ9Y2L6 1034 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
CAPN3-216ENST00000567071 ACANP16112 2415 aa9.8□□□□□ -0.84
CAPN3-216ENST00000567071 CHD5Q8TDI0 1954 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 TCAF2A6NFQ2 919 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 F5H5T6 163 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 PES1O00541 588 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 B4GAT1O43505 415 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 GNA14O95837 355 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 RECKO95980 971 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 APOEP02649 317 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 THRAP10827 490 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms