RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HTR3CQ8WXA8 447 aa15.63■□□□□ 0.09
PALB2-205ENST00000567003 APOOQ9BUR5 198 aa15.63■□□□□ 0.09
PALB2-205ENST00000567003 ACSL6Q9UKU0 697 aa15.63■□□□□ 0.09
PALB2-205ENST00000567003 ARHGEF17Q96PE2 2063 aaPredicted RBP15.63■□□□□ 0.09
PALB2-205ENST00000567003 LSM8O95777 96 aaKnown RBP15.62■□□□□ 0.09
PALB2-205ENST00000567003 PLEKP08567 350 aaPredicted RBP15.62■□□□□ 0.09
PALB2-205ENST00000567003 XPAP23025 273 aaPredicted RBP15.62■□□□□ 0.09
PALB2-205ENST00000567003 PEX5P50542 639 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 CAMK4Q16566 473 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 MAN2A1Q16706 1144 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 KLHDC7AQ5VTJ3 777 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 LVRNQ6Q4G3 990 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 ATG14Q6ZNE5 492 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 PYROXD2Q8N2H3 581 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 PLA2G15Q8NCC3 412 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 GPR156Q8NFN8 814 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 JPH3Q8WXH2 748 aaPredicted RBP15.62■□□□□ 0.09
PALB2-205ENST00000567003 OR1E3Q8WZA6 343 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 USP7Q93009 1102 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 HMCESQ96FZ2 354 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 TMEM74Q96NL1 305 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 PCDH12Q9NPG4 1184 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 MRPL40Q9NQ50 206 aaKnown RBP15.62■□□□□ 0.09
PALB2-205ENST00000567003 LHX3Q9UBR4 397 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 RNF215Q9Y6U7 377 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
PALB2-205ENST00000567003 CXorf51AA0A1B0GTR3 108 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 B4DGG1 531 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 C9orf172C9J069 976 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 TMX2-CTNND1H3BSU7 103 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 TOR1BO14657 336 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 NVLO15381 856 aaKnown RBP15.61■□□□□ 0.09
PALB2-205ENST00000567003 ITGB2P05107 769 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
PALB2-205ENST00000567003 SDC4P31431 198 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 LIG3P49916 1009 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 HDAC4P56524 1084 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 RAD51Q06609 339 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 SRSF1Q07955 248 aaKnown RBP eCLIP15.61■□□□□ 0.09
PALB2-205ENST00000567003 CLCA4Q14CN2 919 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 CYTH1Q15438 398 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 COLEC12Q5KU26 742 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 ZSWIM9Q86XI8 627 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 MSANTD4Q8NCY6 345 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 SLC30A5Q8TAD4 765 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 EPS8L1Q8TE68 723 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 FAM172AQ8WUF8 416 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 FUBP1Q96AE4 644 aaKnown RBP15.61■□□□□ 0.09
PALB2-205ENST00000567003 WDR92Q96MX6 357 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.09
PALB2-205ENST00000567003 NCAPGQ9BPX3 1015 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 C11orf70Q9BRQ4 267 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 NAA15Q9BXJ9 866 aaKnown RBP15.61■□□□□ 0.09
PALB2-205ENST00000567003 NDST4Q9H3R1 872 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 SEMA6CQ9H3T2 930 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 FGF22Q9HCT0 170 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 TMEM51Q9NW97 253 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 DKK3Q9UBP4 350 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 ZFC3H1O60293 1989 aaKnown RBP15.61■□□□□ 0.09
PALB2-205ENST00000567003 LRRK2Q5S007 2527 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 NBASA2RRP1 2371 aa15.61■□□□□ 0.09
PALB2-205ENST00000567003 NBPF19A0A087WUL8 3843 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 TMEM202A6NGA9 273 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 C2CD4BA6NLJ0 364 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 SUV39H1O43463 412 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 TNFP01375 233 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 HTR1BP28222 390 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 ZFP36L1Q07352 338 aaKnown RBP15.6■□□□□ 0.09
PALB2-205ENST00000567003 C16orf72Q14CZ0 275 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 TPD52L1Q16890 204 aaPredicted RBP15.6■□□□□ 0.09
PALB2-205ENST00000567003 VWA3BQ502W6 1294 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 CERCAMQ5T4B2 595 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 PHF19Q5T6S3 580 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 ARCQ7LC44 396 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 SPRED1Q7Z699 444 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 TAF8Q7Z7C8 310 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 SLITRK4Q8IW52 837 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 FAM46DQ8NEK8 389 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 CCL4L1Q8NHW4 92 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 KIAA1468Q9P260 1216 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 MFHAS1Q9Y4C4 1052 aa15.6■□□□□ 0.09
PALB2-205ENST00000567003 SPENQ96T58 3664 aaKnown RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 TMEM110-MUSTN1A8MSY1 372 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 RASA4BC9J798 803 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 F8VZ95 297 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 RASA4O43374 803 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 BUB1BO60566 1050 aaPredicted RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 CHRNB2P17787 502 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 MMP12P39900 470 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 ELP6Q0PNE2 266 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 RTL3Q8N8U3 475 aaKnown RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 PMEPA1Q969W9 287 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 FUCA2Q9BTY2 467 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 TMEM168Q9H0V1 697 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 SUDS3Q9H7L9 328 aaPredicted RBP15.59■□□□□ 0.09
PALB2-205ENST00000567003 RDH14Q9HBH5 336 aa15.59■□□□□ 0.09
PALB2-205ENST00000567003 SEPT10Q9P0V9 454 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms