RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 HGSNATQ68CP4 663 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 NYAP1Q6ZVC0 841 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 EFL1Q7Z2Z2 1120 aaKnown RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 SNIP1Q8TAD8 396 aaKnown RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 MAPK15Q8TD08 544 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 TBATAQ96M53 351 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 DEPDC7Q96QD5 511 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 CINPQ9BW66 212 aaPredicted RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 ATP8A1Q9Y2Q0 1164 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 EME2A4GXA9 379 aaPredicted RBP18.45■□□□□ 0.54
USB1-213ENST00000566292 LMO7DNF2Z398 122 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 CSO75390 466 aaKnown RBP18.45■□□□□ 0.54
USB1-213ENST00000566292 CELA2BP08218 269 aaPredicted RBP18.45■□□□□ 0.54
USB1-213ENST00000566292 MYBL1P10243 752 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 TSHRP16473 764 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 SERPINA4P29622 427 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 PBX1P40424 430 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 ZNF135P52742 658 aaPredicted RBP18.45■□□□□ 0.54
USB1-213ENST00000566292 PPARDQ03181 441 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 RALGDSQ12967 914 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 AGERQ15109 404 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 SMTNL2Q2TAL5 461 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 CFAP58Q5T655 872 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 FAXCQ5TGI0 409 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 ERAP2Q6P179 960 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 SLC35F3Q8IY50 421 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 FGF11Q92914 225 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 ECHDC3Q96DC8 303 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 TRIM11Q96F44 468 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 SLC13A1Q9BZW2 595 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 ABCG4Q9H172 646 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 ATP13A3Q9H7F0 1226 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 MRPL47Q9HD33 250 aaKnown RBP18.45■□□□□ 0.54
USB1-213ENST00000566292 ETNK2Q9NVF9 386 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 NCKIPSDQ9NZQ3 722 aa18.45■□□□□ 0.54
USB1-213ENST00000566292 BAHCC1Q9P281 2608 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 YY2O15391 372 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 LZTS3O60299 673 aaPredicted RBP18.44■□□□□ 0.54
USB1-213ENST00000566292 PCK1P35558 622 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 PEX5P50542 639 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 FANCCQ00597 558 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 NSUN2Q08J23 767 aaKnown RBP eCLIP18.44■□□□□ 0.54
USB1-213ENST00000566292 INPP5AQ14642 412 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 RFTN1Q14699 578 aaPredicted RBP18.44■□□□□ 0.54
USB1-213ENST00000566292 NR0B2Q15466 257 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 DPYSL2Q16555 572 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 ALG11Q2TAA5 492 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 TBC1D25Q3MII6 688 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 PERM1Q5SV97 790 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 C6orf132Q5T0Z8 1188 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 TSACCQ96A04 125 aaPredicted RBP18.44■□□□□ 0.54
USB1-213ENST00000566292 BBC3Q96PG8 261 aaPredicted RBP18.44■□□□□ 0.54
USB1-213ENST00000566292 APOOQ9BUR5 198 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 CBX8Q9HC52 389 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 OR1A2Q9Y585 309 aa18.44■□□□□ 0.54
USB1-213ENST00000566292 SYCE3A1L190 88 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 TRAFD1O14545 582 aaPredicted RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 CASC3O15234 703 aaKnown RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 USP12O75317 370 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 MPOP05164 745 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 PCCBP05166 539 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 ANXA6P08133 673 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 AMPD1P23109 780 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 ACTN2P35609 894 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 SCNN1BP51168 640 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 HK3P52790 923 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 BCL2L1Q07817 233 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 SLC10A7Q0GE19 358 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 COL9A2Q14055 689 aaPredicted RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 LBRQ14739 615 aaKnown RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 NFATC4Q14934 902 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 ACAP1Q15027 740 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 TDRD12Q587J7 1177 aaKnown RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 KCTD16Q68DU8 428 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 TXNRD3NBQ6F5E7 133 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 CRTC1Q6UUV9 634 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 ENPP7Q6UWV6 458 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 POLNQ7Z5Q5 900 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 LUZP1Q86V48 1076 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 HID1Q8IV36 788 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 LZTR1Q8N653 840 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 PLA2G15Q8NCC3 412 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 PSKH2Q96QS6 385 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 ZWILCHQ9H900 591 aa18.43■□□□□ 0.54
USB1-213ENST00000566292 FASNP49327 2511 aaKnown RBP18.43■□□□□ 0.54
USB1-213ENST00000566292 A0A1W2PQJ5 194 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 TTC24A2A3L6 582 aaPredicted RBP18.42■□□□□ 0.54
USB1-213ENST00000566292 CFAP69A5D8W1 941 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 TMEM110-MUSTN1A8MSY1 372 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 H3BRJ5 948 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 PEX11BO96011 259 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 RARAP10276 462 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 GM2AP17900 193 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 BLKP51451 505 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 GABREP78334 506 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 MTM1Q13496 603 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 TCEA2Q15560 299 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 ISXQ2M1V0 245 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 BOLA3Q53S33 107 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 TMCO4Q5TGY1 634 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms