RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 LIG3P49916 1009 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 BLKP51451 505 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 PPARDQ03181 441 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 BCL2L1Q07817 233 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 SMTNL2Q2TAL5 461 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 DEFB133Q30KQ1 61 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 PRRT3Q5FWE3 981 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 TMCO4Q5TGY1 634 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 POLNQ7Z5Q5 900 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 IFI44Q8TCB0 444 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 HNRNPLLQ8WVV9 542 aaKnown RBP20.02■□□□□ 0.8
CLN6-206ENST00000565471 TEKT4Q8WW24 435 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 DEPDC7Q96QD5 511 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 LRRC61Q9BV99 259 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 BOCQ9BWV1 1114 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 THAP2Q9H0W7 228 aa20.02■□□□□ 0.8
CLN6-206ENST00000565471 TCEAL2Q9H3H9 227 aaPredicted RBP20.02■□□□□ 0.8
CLN6-206ENST00000565471 ANKRD36A6QL64 1941 aa20.02■□□□□ 0.79
CLN6-206ENST00000565471 DSPP15924 2871 aaKnown RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 EME2A4GXA9 379 aaPredicted RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 GOLGA6L19H0YKK7 550 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 MUSKO15146 869 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 LZTS3O60299 673 aaPredicted RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 GCATO75600 419 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 RARAP10276 462 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 TCF4P15884 667 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 POLR2LP62875 67 aaKnown RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 SEMG2Q02383 582 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 LBRQ14739 615 aaKnown RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 FAXCQ5TGI0 409 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 TMCO3Q6UWJ1 677 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 PDZD3Q86UT5 571 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 TP53INP2Q8IXH6 220 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 SPOCK2Q92563 424 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 HSPH1Q92598 858 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 CSPG4P5Q96PW8 444 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLN6-206ENST00000565471 IP6K2Q9UHH9 426 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 LUC7L2Q9Y383 392 aaKnown RBP20.01■□□□□ 0.79
CLN6-206ENST00000565471 ZFYVE26Q68DK2 2539 aa20.01■□□□□ 0.79
CLN6-206ENST00000565471 TRAFD1O14545 582 aaPredicted RBP20■□□□□ 0.79
CLN6-206ENST00000565471 CYP1A2P05177 515 aa20■□□□□ 0.79
CLN6-206ENST00000565471 ANXA6P08133 673 aa20■□□□□ 0.79
CLN6-206ENST00000565471 AMPD1P23109 780 aa20■□□□□ 0.79
CLN6-206ENST00000565471 HTR1BP28222 390 aa20■□□□□ 0.79
CLN6-206ENST00000565471 HSPA9P38646 679 aaKnown RBP20■□□□□ 0.79
CLN6-206ENST00000565471 SCNN1BP51168 640 aa20■□□□□ 0.79
CLN6-206ENST00000565471 ADKP55263 362 aaKnown RBP20■□□□□ 0.79
CLN6-206ENST00000565471 SLC10A7Q0GE19 358 aa20■□□□□ 0.79
CLN6-206ENST00000565471 RALGDSQ12967 914 aa20■□□□□ 0.79
CLN6-206ENST00000565471 MTM1Q13496 603 aa20■□□□□ 0.79
CLN6-206ENST00000565471 NFATC4Q14934 902 aa20■□□□□ 0.79
CLN6-206ENST00000565471 NR0B2Q15466 257 aa20■□□□□ 0.79
CLN6-206ENST00000565471 CDKN3Q16667 212 aa20■□□□□ 0.79
CLN6-206ENST00000565471 C6orf132Q5T0Z8 1188 aa20■□□□□ 0.79
CLN6-206ENST00000565471 FSTL5Q8N475 847 aaPredicted RBP20■□□□□ 0.79
CLN6-206ENST00000565471 ATL2Q8NHH9 583 aa20■□□□□ 0.79
CLN6-206ENST00000565471 SNIP1Q8TAD8 396 aaKnown RBP20■□□□□ 0.79
CLN6-206ENST00000565471 GLMNQ92990 594 aa20■□□□□ 0.79
CLN6-206ENST00000565471 APOOQ9BUR5 198 aa20■□□□□ 0.79
CLN6-206ENST00000565471 ABCG4Q9H172 646 aa20■□□□□ 0.79
CLN6-206ENST00000565471 ANAPC7Q9UJX3 599 aa20■□□□□ 0.79
CLN6-206ENST00000565471 A0A087X0T9 212 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 A0A1W2PQ67 120 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 TLX3O43711 291 aaPredicted RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 PEX11BO96011 259 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 PRKCGP05129 697 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 FAM228BP0C875 321 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 TSHRP16473 764 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 SERPINB6P35237 376 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 EIF2S3P41091 472 aaKnown RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 RPIAP49247 311 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 HK3P52790 923 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 SLC25A11Q02978 314 aaKnown RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 C1orf61Q13536 156 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 ZNF235Q14590 738 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 INPP5AQ14642 412 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 GUSBP11Q6P575 273 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 DPPA4Q7L190 304 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 EFL1Q7Z2Z2 1120 aaKnown RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 SDR16C5Q8N3Y7 309 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 TPCN2Q8NHX9 752 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 MAPK15Q8TD08 544 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 CPLX3Q8WVH0 158 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 NAT6Q93015 286 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 NUP85Q9BW27 656 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 CLPBQ9H078 707 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 PCDH18Q9HCL0 1135 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 ETNK2Q9NVF9 386 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 RCOR3Q9P2K3 495 aaPredicted RBP19.99■□□□□ 0.79
CLN6-206ENST00000565471 PCDHB1Q9Y5F3 818 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 CACNA1GO43497 2377 aa19.99■□□□□ 0.79
CLN6-206ENST00000565471 CPED1A4D0V7 1026 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 BRINP1O60477 761 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 RASGRP1O95267 797 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 GYPCP04921 128 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 ALPIP09923 528 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 ELFN1P0C7U0 828 aa19.98■□□□□ 0.79
CLN6-206ENST00000565471 CR2P20023 1033 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms