RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 SLC25A23Q9BV35 468 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 OSBPL11Q9BXB4 747 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 SENP6Q9GZR1 1112 aaPredicted RBP7.31□□□□□ -1.24
SMG1-210ENST00000565224 ATXN3LQ9H3M9 355 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 COQ10BQ9H8M1 238 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 TNFRSF12AQ9NP84 129 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 CCDC167Q9P0B6 97 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 THEGQ9P2T0 379 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 TMCO1Q9UM00 188 aa7.31□□□□□ -1.24
SMG1-210ENST00000565224 CCL15-CCL14A0A0B4J2E2 113 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TCRBV3S1A0A5B6 114 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 C7orf72A4D263 438 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PRORSD1PA6NEY8 169 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 MRASO14807 208 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SRP72O76094 671 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 TMCC1O94876 653 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 MYL3P08590 195 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CCDC166P0CW27 439 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 BDNFP23560 247 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SLC7A1P30825 629 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 LEPRP48357 1165 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 PLK1P53350 603 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TXNL4AP83876 142 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 EIF4EBP2Q13542 120 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 IKBKEQ14164 716 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 ACAP2Q15057 778 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 NRF1Q16656 503 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CCL15Q16663 113 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PPP1R3AQ16821 1122 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PABPC1LQ4VXU2 614 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 LRRC23Q53EV4 343 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 SAMD4BQ5PRF9 694 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 PRAMEF19Q5SWL8 479 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 MANEALQ5VSG8 457 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 FAM45BPQ6NSW5 357 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 HACD2Q6Y1H2 254 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 KDELC2Q7Z4H8 507 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PTAR1Q7Z6K3 402 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 AMIGO2Q86SJ2 522 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 HERC6Q8IVU3 1022 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 FAM45AQ8TCE6 357 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 LRTOMTQ8WZ04 291 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 LPGAT1Q92604 370 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 EZH1Q92800 747 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 PBXIP1Q96AQ6 731 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TRMOQ9BU70 441 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SEMA6AQ9H2E6 1030 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 OCEL1Q9H607 264 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CD300AQ9UGN4 299 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CROTQ9UKG9 612 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 COL4A4P53420 1690 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 ARHGEF37A1IGU5 675 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CASTOR2A6NHX0 329 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 NRP2O60462 931 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CSPG5O95196 566 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 ODC1P11926 461 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 HDCP19113 662 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 CCR1P32246 355 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 ATP4BP51164 291 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 AFF1P51825 1210 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 WNT3AP56704 352 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SLC14A2Q15849 920 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PCSK7Q16549 785 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TIGD5Q53EQ6 642 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 ZNF789Q5FWF6 425 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 MTX3Q5HYI7 312 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 C6orf10Q5SRN2 563 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 HECTD2Q5U5R9 776 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 AFMIDQ63HM1 303 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 FAM171BQ6P995 826 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 KDELC1Q6UW63 502 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 USP50Q70EL3 339 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 CARM1Q86X55 608 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 LRRC49Q8IUZ0 686 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 ZC3H15Q8WU90 426 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 SLCO4A1Q96BD0 722 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 PHF21BQ96EK2 531 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 FCRL2Q96LA5 508 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 RANBP9Q96S59 729 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 UHRF1Q96T88 793 aaPredicted RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 EFHD1Q9BUP0 239 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 GSTO2Q9H4Y5 243 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 FAM105AQ9NUU6 356 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 NDFIP2Q9NV92 336 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 MIOSQ9NXC5 875 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TMEM181Q9P2C4 612 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 IPO11Q9UI26 975 aaKnown RBP7.3□□□□□ -1.24
SMG1-210ENST00000565224 RNF11Q9Y3C5 154 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TRAF6Q9Y4K3 522 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SNX13Q9Y5W8 968 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 AK5Q9Y6K8 562 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 TLL2Q9Y6L7 1015 aa7.3□□□□□ -1.24
SMG1-210ENST00000565224 SHROOM3Q8TF72 1996 aa7.29□□□□□ -1.24
SMG1-210ENST00000565224 STAMBPO95630 424 aa7.29□□□□□ -1.24
SMG1-210ENST00000565224 HSPA8P11142 646 aaKnown RBP7.29□□□□□ -1.24
SMG1-210ENST00000565224 IMPDH1P20839 514 aa7.29□□□□□ -1.24
SMG1-210ENST00000565224 FGFR3P22607 806 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms