RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 DNAJB6O75190 326 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ATP6AP2O75787 350 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ALOX15P16050 662 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CFL1P23528 166 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 PMLP29590 882 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SKIV2L2P42285 1042 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 COPAP53621 1224 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GPX6P59796 221 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NIPAL4Q0D2K0 466 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MBTPS1Q14703 1052 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MGAT5BQ3V5L5 792 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CCDC153Q494R4 210 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RNF180Q86T96 592 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM86AQ8N2M4 240 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FNIP1Q8TF40 1166 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TFB1MQ8WVM0 346 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 MFSD3Q96ES6 412 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SCYL1Q96KG9 808 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 APOL4Q9BPW4 351 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.38□□□□□ -1.876e-7■■■■□ 19.3
CHD9-213ENST00000564845 AFF4Q9UHB7 1163 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 DERAQ9Y315 318 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SCN1AP35498 2009 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM237BA0A1B0GVD1 139 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 LRRC14BA6NHZ5 514 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM88BA6NKF7 163 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 J3KR12 359 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PLK4O00444 970 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PRPSAP2O60256 369 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PMPCBO75439 489 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 VAV1P15498 845 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GCAP28676 217 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 HSD17B2P37059 387 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ELK3P41970 407 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SMIM11AP58511 58 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 LILRA4P59901 499 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MYBPC3Q14896 1274 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TRIM71Q2Q1W2 868 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 TOR1AIP1Q5JTV8 583 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZNF438Q7Z4V0 828 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 HORMAD1Q86X24 394 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NPWQ8N729 165 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GSTCDQ8NEC7 633 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CERS2Q96G23 380 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZFRQ96KR1 1074 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 KATNBL1Q9H079 304 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CYP3A43Q9HB55 503 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 INTS7Q9NVH2 962 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 ITGA11Q9UKX5 1188 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 DRG1Q9Y295 367 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 PTCH2Q9Y6C5 1203 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 A0A087WUV0 522 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 EXOC1LA0A1B0GW35 172 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM187AA6NFU0 413 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 HACD1B0YJ81 288 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 AP3D1O14617 1153 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 EIF4BP23588 611 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 MAP4P27816 1152 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 RFC2P35250 354 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 DUSP4Q13115 394 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SCGB2A2Q13296 93 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SP140Q13342 867 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SF1Q15637 639 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 PSMD5Q16401 504 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C9orf57Q5W0N0 161 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MRNIPQ6NTE8 343 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZBTB46Q86UZ6 589 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CRLF3Q8IUI8 442 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 DENND6AQ8IWF6 608 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ADGRF2Q8IZF7 708 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM110BQ8TC76 370 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PNPT1Q8TCS8 783 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZNF296Q8WUU4 475 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CD101Q93033 1021 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 Q96MT0 163 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CCT8L2Q96SF2 557 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GPR62Q9BZJ7 368 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CCSER2Q9H7U1 834 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NECTIN3Q9NQS3 549 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TBC1D14Q9P2M4 693 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CD84Q9UIB8 345 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGA2Q9Y5H1 932 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 WDR90Q96KV7 1748 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GMNCA6NCL1 334 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GSTA1P08263 222 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PSMB4P28070 264 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MSH2P43246 934 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MAGEA9P43362 315 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RFX4Q33E94 735 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PAQR9Q6ZVX9 377 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 BBS7Q8IWZ6 715 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 DCP1BQ8IZD4 617 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CGRRF1Q99675 332 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM167BQ9BTA0 163 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 IER2Q9BTL4 223 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 HTATIP2Q9BUP3 242 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 YIPF2Q9BWQ6 316 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NOL11Q9H8H0 719 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms